Bayesian Computing with INLA: A Review

Posted: 21 Mar 2017

See all articles by Håvard Rue

Håvard Rue

Norwegian University of Science and Technology (NTNU)

Andrea Riebler

Norwegian University of Science and Technology (NTNU)

Sigrunn H. Sørbye

University of Tromsø - The Arctic University of Norway

Janine B. Illian

St. Andrew’s University

Daniel Simpson

University of Bath

Finn Lindgren

University of Edinburgh

Date Written: March 2017

Abstract

The key operation in Bayesian inference is to compute high-dimensional integrals. An old approximate technique is the Laplace method or approximation, which dates back to Pierre-Simon Laplace (1774). This simple idea approximates the integrand with a second-order Taylor expansion around the mode and computes the integral analytically. By developing a nested version of this classical idea, combined with modern numerical techniques for sparse matrices, we obtain the approach of integrated nested Laplace approximations (INLA) to do approximate Bayesian inference for latent Gaussian models (LGMs). LGMs represent an important model abstraction for Bayesian inference and include a large proportion of the statistical models used today. In this review, we discuss the reasons for the success of the INLA approach, the R-INLA package, why it is so accurate, why the approximations are very quick to compute, and why LGMs make such a useful concept for Bayesian computing.

Suggested Citation

Rue, Håvard and Riebler, Andrea and Sørbye, Sigrunn H. and Illian, Janine B. and Simpson, Daniel and Lindgren, Finn, Bayesian Computing with INLA: A Review (March 2017). Annual Review of Statistics and Its Application, Vol. 4, Issue 1, pp. 395-421, 2017, Available at SSRN: https://ssrn.com/abstract=2937741 or http://dx.doi.org/10.1146/annurev-statistics-060116-054045

Håvard Rue (Contact Author)

Norwegian University of Science and Technology (NTNU) ( email )

Høgskoleringen
Trondheim NO-7491, 7491
Norway

Andrea Riebler

Norwegian University of Science and Technology (NTNU) ( email )

Høgskoleringen
Trondheim NO-7491, 7491
Norway

Sigrunn H. Sørbye

University of Tromsø - The Arctic University of Norway

UiT Norges arktiske universitet
Postboks 6050 Langnes
Tromsø, 9037
Norway

Janine B. Illian

St. Andrew’s University ( email )

Momoyama Gakuin University
1-1-Manalino Tzumi
Osaka, 554-1198
Japan

Daniel Simpson

University of Bath ( email )

Claverton Down
Bath, BA2 7AY
United Kingdom

Finn Lindgren

University of Edinburgh ( email )

Old College
South Bridge
Edinburgh, Scotland EH8 9JY
United Kingdom

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