lancet-header

Preprints with The Lancet is a collaboration between The Lancet Group of journals and SSRN to facilitate the open sharing of preprints for early engagement, community comment, and collaboration. Preprints available here are not Lancet publications or necessarily under review with a Lancet journal. These preprints are early-stage research papers that have not been peer-reviewed. The usual SSRN checks and a Lancet-specific check for appropriateness and transparency have been applied. The findings should not be used for clinical or public health decision-making or presented without highlighting these facts. For more information, please see the FAQs.

Severity Detection For the Coronavirus Disease 2019 (COVID-19) Patients Using a Machine Learning Model Based on the Blood and Urine Tests

27 Pages Posted: 9 Apr 2020

See all articles by Nan Zhang

Nan Zhang

Jilin University (JLU) - First Hospital

Ruochi Zhang

Jilin University (JLU) - Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education

Haochen Yao

Jilin University (JLU) - Department of Pathogenobiology

Hong Xu

Jilin University (JLU) - First Hospital

Meiyu Duan

Jilin University (JLU) - BioKnow Health Informatics Laboratory

Tianqi Xie

University of Pittsburgh - School of Computing and Information

Jiahui Pan

Jilin University (JLU) - Department of Pathogenobiology

E’jun Peng

Huazhong University of Science and Technology - Department of Urology

Juanjuan Huang

Jilin University (JLU) - Department of Pathogenobiology

Yingli Zhang

Jilin University (JLU) - First Hospital

Xiaoming Xu

Jilin University (JLU) - First Hospital

Fengfeng Zhou

Jilin University (JLU) - BioKnow Health Informatics Laboratory

Guoqing Wang

Jilin University (JLU) - Department of Pathogenobiology

More...

Abstract

Background: The recent outbreak of the coronavirus disease-2019 (COVID-19) caused serious challenges to the human society in China and across the world. COVID-19 induced pneumonia in human hosts and carried a highly inter-person contagiousness. The COVID-19 patients may carry severe symptoms, and some of them may even die of major organ failures. We aim to utilize the machine learning algorithms to build the COVID-19 severeness detection model.

Methods: This study recruited the binary classification problem between 75 severely illed COVID-19 infected patients and the other 62 patients with mild symptoms. Support vector machine (SVM) demonstrated a promising detection accuracy after 32 features were detected to be significantly associated with the COVID-19 severeness. These 32 features were further screened for inter-feature redundancies.

Findings: The severely illed patients had a higher serum level of neutrophil percentage and lower serum levels of monocyte percentage and calcium compared with those mild ones. The blood test features demonstrated much more significant inter-group differences than the urine test features. These three blood test features as candidate severeness biomarkers, i.e., serum ferritin, hs-CRP, interleukin-2R, and tumor necrosis factor-α. The final SVM model achieved the overall accuracy 0.8148 using 28 features.

Interpretation: This study utilized the machine learning algorithms to detect the COVID-19 severely ill patients from those with only mild symptoms. Our experimental data demonstrated strong correlations with the COVID-19 severeness. The 28 biomarkers may also be investigated for their underlining mechanisms of their roles in the COVID-19 severely ill patients.

Funding Statement: This work was supported by grants from The epidemiology, early warning and response techniques of major infectious diseases in the Belt and Road Initiative (#2018ZX10101002), National Natural Science Foundation of China (#81871699), Jilin Provincial Key Laboratory of Big Data Intelligent Computing (20180622002JC), the Education Department of Jilin Province (JJKH20180145KJ), Foundation of Jilin Province Science and Technology Department (#172408GH010234983), and the startup grant of the Jilin University. This work was also partially supported by the Bioknow MedAI Institute (BMCPP-2018-001), the High Performance Computing Center of Jilin University, and the Fundamental Research Funds for the Central Universities, JLU.

Declaration of Interests: The authors declare no competing interests.

Ethics Approval Statement: This study was approved by the Ethics Commission of the First Hospital of Jilin University. Informed consent was waived for this emerging infectious disease.

Keywords: COVID-19; Severity detection; Machine learning model; blood and urine tests

Suggested Citation

Zhang, Nan and Zhang, Ruochi and Yao, Haochen and Xu, Hong and Duan, Meiyu and Xie, Tianqi and Pan, Jiahui and Peng, E’jun and Huang, Juanjuan and Zhang, Yingli and Xu, Xiaoming and Zhou, Fengfeng and Wang, Guoqing, Severity Detection For the Coronavirus Disease 2019 (COVID-19) Patients Using a Machine Learning Model Based on the Blood and Urine Tests (3/26/2020). Available at SSRN: https://ssrn.com/abstract=3564426 or http://dx.doi.org/10.2139/ssrn.3564426

Nan Zhang

Jilin University (JLU) - First Hospital

3808 Jiefang Rd.
Hongqi Street
Changchun, Jilin
China

Ruochi Zhang

Jilin University (JLU) - Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education

Jilin, Changchun 130012
China

Haochen Yao

Jilin University (JLU) - Department of Pathogenobiology

Jilin, Changchun
China

Hong Xu

Jilin University (JLU) - First Hospital

3808 Jiefang Rd.
Hongqi Street
Changchun, Jilin
China

Meiyu Duan

Jilin University (JLU) - BioKnow Health Informatics Laboratory

Jilin, Changchun 130012
China

Tianqi Xie

University of Pittsburgh - School of Computing and Information

135 N Bellefield Ave.
Pittsburgh, PA 15213
United States

Jiahui Pan

Jilin University (JLU) - Department of Pathogenobiology

Jilin, Changchun
China

E’Jun Peng

Huazhong University of Science and Technology - Department of Urology

China

Juanjuan Huang

Jilin University (JLU) - Department of Pathogenobiology

Jilin, Changchun
China

Yingli Zhang

Jilin University (JLU) - First Hospital

3808 Jiefang Rd.
Hongqi Street
Changchun, Jilin
China

Xiaoming Xu

Jilin University (JLU) - First Hospital

3808 Jiefang Rd.
Hongqi Street
Changchun, Jilin
China

Fengfeng Zhou

Jilin University (JLU) - BioKnow Health Informatics Laboratory ( email )

Jilin, Changchun 130012
China

Guoqing Wang (Contact Author)

Jilin University (JLU) - Department of Pathogenobiology ( email )

Jilin, Changchun
China

Click here to go to TheLancet.com

Paper statistics

Downloads
250
Abstract Views
2,503
PlumX Metrics