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Epidemiology, Risk Factors and Clinical Course of SARS-CoV-2 Infected Patients in a Swiss University Hospital: An Observational Retrospective Study

29 Pages Posted: 12 May 2020

See all articles by Jean Regina

Jean Regina

University of Lausanne - Service of Infectious Diseases

Matthaios Papadimitriou-Olivgeris

University of Lausanne - Service of Infectious Diseases

Raphaël Burger

University of Lausanne - Service of Infectious Diseases

Paraskevas Filippidis

University of Lausanne - Service of Infectious Diseases

Jonathan Tschopp

University of Lausanne - Service of Infectious Diseases

Florian Desgranges

University of Lausanne - Service of Infectious Diseases

Benjamin Viala

University of Lausanne - Service of Infectious Diseases

Eleftheria Kampouri

University of Lausanne - Service of Infectious Diseases

Laurence Rochat

University of Lausanne - Service of Infectious Diseases

David Haefliger

University of Lausanne - Service of Infectious Diseases

Mehdi Belkoniene

University of Lausanne - Service of Infectious Diseases

Carlos Fidalgo

University of Lausanne - Service of Infectious Diseases

Antonios Kritikos

University of Lausanne - Service of Infectious Diseases

Katia Jaton

University of Lausanne - Institute of Microbiology

Laurence Senn

University of Lausanne - Service of Internal Medicine

Pierre-Alexandre Bart

University of Lausanne - Service of Internal Medicine

Jean-Luc Pagani

University of Lausanne - Intensive Care Medicine

Oriol Manuel

University of Lausanne - Service of Infectious Diseases

Loïc Lhopitallier

University of Lausanne - Service of Infectious Diseases

More...

Abstract

Background: Coronavirus disease 2019 (COVID-19) is now a global pandemic with Europe and the USA at its epicenter. Little is known about risk factors for progression to severe disease in Europe. This study aims to describe the epidemiology of COVID-19 patients in a Swiss university hospital.

Methods: This retrospective observational study included all adult patients hospitalized with a laboratory confirmed SARS-CoV-2 infection from March 1 to March 25, 2020. We extracted data from electronic health records. The primary outcome was the need to mechanical ventilation at day 14.  We used multivariate logistic regression to identify risk factors for mechanical ventilation. Follow-up was of at least 14 days.

Findings: 200 patients were included, of whom 37 (18·5%) needed mechanical ventilation at 14 days. The median time from symptoms onset to mechanical ventilation was 9·5 days (IQR 7.00, 12.75). Multivariable regression showed increased odds of mechanical ventilation in males (3.26, 1.21-9.8; p=0.025), in patients who presented with a qSOFA score ≥2 (6.02, 2.09-18.82; p=0.001), with bilateral infiltrate (5.75, 1.91-21.06; p=0.004) or with a CRP of 40 mg/l or greater (4.73, 1.51-18.58; p=0.013).

Interpretation: This study gives some insight in the epidemiology and clinical course of patients admitted in a European tertiary hospital with SARS-CoV-2 infection. Male sex, high qSOFA score, CRP of 40 mg/l or greater and a bilateral radiological infiltrate could help clinicians identify patients at high risk for mechanical ventilation.

Funding Statement: No additional funding was sought for this study.

Declaration of Interests: The authors do not declare any conflicts of interest.

Ethics Approval Statement: This project was conducted in accordance with the Declaration of Helsinki, the principles of Good Clinical Practice and the Swiss Human Research Act (HRA). The project received approval from the Ethics Committee of canton Vaud, Switzerland (2020-00657) that waived the need for informed consent. All data were anonymized before analysis.

Keywords: COVID-19; SARS-CoV-2; Switzerland; Mechanical Ventilation

Suggested Citation

Regina, Jean and Papadimitriou-Olivgeris, Matthaios and Burger, Raphaël and Filippidis, Paraskevas and Tschopp, Jonathan and Desgranges, Florian and Viala, Benjamin and Kampouri, Eleftheria and Rochat, Laurence and Haefliger, David and Belkoniene, Mehdi and Fidalgo, Carlos and Kritikos, Antonios and Jaton, Katia and Senn, Laurence and Bart, Pierre-Alexandre and Pagani, Jean-Luc and Manuel, Oriol and Lhopitallier, Loïc, Epidemiology, Risk Factors and Clinical Course of SARS-CoV-2 Infected Patients in a Swiss University Hospital: An Observational Retrospective Study (4/15/2020). Available at SSRN: https://ssrn.com/abstract=3578783 or http://dx.doi.org/10.2139/ssrn.3578783

Jean Regina (Contact Author)

University of Lausanne - Service of Infectious Diseases

Rue du Bugnon 46
Lausanne, 1011
Switzerland

Matthaios Papadimitriou-Olivgeris

University of Lausanne - Service of Infectious Diseases

Rue du Bugnon 46
Lausanne, 1011
Switzerland

Raphaël Burger

University of Lausanne - Service of Infectious Diseases

Rue du Bugnon 46
Lausanne, 1011
Switzerland

Paraskevas Filippidis

University of Lausanne - Service of Infectious Diseases

Rue du Bugnon 46
Lausanne, 1011
Switzerland

Jonathan Tschopp

University of Lausanne - Service of Infectious Diseases

Rue du Bugnon 46
Lausanne, 1011
Switzerland

Florian Desgranges

University of Lausanne - Service of Infectious Diseases ( email )

Rue du Bugnon 46
Lausanne, 1011
Switzerland

Benjamin Viala

University of Lausanne - Service of Infectious Diseases

Rue du Bugnon 46
Lausanne, 1011
Switzerland

Eleftheria Kampouri

University of Lausanne - Service of Infectious Diseases

Rue du Bugnon 46
Lausanne, 1011
Switzerland

Laurence Rochat

University of Lausanne - Service of Infectious Diseases

Rue du Bugnon 46
Lausanne, 1011
Switzerland

David Haefliger

University of Lausanne - Service of Infectious Diseases

Rue du Bugnon 46
Lausanne, 1011
Switzerland

Mehdi Belkoniene

University of Lausanne - Service of Infectious Diseases

Rue du Bugnon 46
Lausanne, 1011
Switzerland

Carlos Fidalgo

University of Lausanne - Service of Infectious Diseases

Rue du Bugnon 46
Lausanne, 1011
Switzerland

Antonios Kritikos

University of Lausanne - Service of Infectious Diseases

Rue du Bugnon 46
Lausanne, 1011
Switzerland

Katia Jaton

University of Lausanne - Institute of Microbiology

Lausanne
Switzerland

Laurence Senn

University of Lausanne - Service of Internal Medicine

Lausanne,
Switzerland

Pierre-Alexandre Bart

University of Lausanne - Service of Internal Medicine

Lausanne,
Switzerland

Jean-Luc Pagani

University of Lausanne - Intensive Care Medicine

Switzerland

Oriol Manuel

University of Lausanne - Service of Infectious Diseases

Rue du Bugnon 46
Lausanne, 1011
Switzerland

Loïc Lhopitallier

University of Lausanne - Service of Infectious Diseases ( email )

Rue du Bugnon 46
Lausanne, 1011
Switzerland

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