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DeepQCT: Predicting Fragility Fracture from High-Resolution Peripheral Quantitative CT Using Deep Learning

22 Pages Posted: 3 Apr 2024

See all articles by Fangyuan Chen

Fangyuan Chen

Tsinghua University

Lijia Cui

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Department of Endocrinology

Qiao Jin

Tsinghua University - School of Medicine

Yushuo Wu

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital

Jiaqi Li

Tsinghua University - Department of Automation

Yan Jiang

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital

Wei Liu

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital

Yue Chi

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital

Ruizhi Jiajue

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital

Qianqian Pang

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital

Ou Wang

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital

Mei Li

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital

Xiaoping Xing

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital

Wei Yu

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Department of Radiology

Xuegong Zhang

Tsinghua University - School of Medicine

Weibo Xia

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Department of Endocrinology

More...

Abstract

Background: Osteoporosis is prevalent in elderly women, which causes fragility fracture and hence increased mortality and morbidity. Predicting osteoporotic fracture risk is both clinically-beneficial and cost-effective. However, traditional tools using clinical factors and bone mineral density (BMD) fail to reflect bone microstructure. Here we aim to use high-resolution peripheral quantitative CT (HR-pQCT) images to construct deep-learning models which predict fragility fracture history in elderly Chinese women.

Methods: We used ChiVOS, a community-based national cohort of 2,664 Chinese elderly women. Demographic data, BMD, and HR-pQCT from 216 patients were used to construct three groups of models: BMD, pQCT-index, and DeepQCT. For DeepQCT, we used ResNet34 as classifier, and logistic regression for late fusion. Models were developed using 6-fold cross-validation in development set (90%, N=195), and tested in internal test set (10%, N=21). We applied unsupervised clustering on HR-pQCT indices to derive patient subgroups.

Findings: DeepQCT (best model AUC 0.86-0.94) was superior or similar to pQCT-index (best model AUC 0.8-0.93), which both outperformed BMD (best model AUC 0.54-0.78). Surprisingly, DeepQCT built from non-weight-bearing bones performed similarly to weight-bearing bones. Furthermore, two distinct patient groups were classified using HR-pQCT indices. The one with higher DeepQCT risk score showed lower volumetric BMD, bone more microarchitectural abnormalities, and had higher probability of osteoporosis and fragility fracture history.

Interpretation: DeepQCT scores and HR-pQCT-index permit early recognition of patients with high risk of fragility fracture. This established framework can be easily adapted for other diagnostic tasks using HR-pQCT scans, which promotes bone health management via digital medicine.

Funding: This research was supported by the National Natural Science Foundation of China (LC, 82100946; WX, 82270938), CAMS Innovation Fund for Medical Sciences (WX, 2021-I2M-1-002), National Key R&D Program of China (WX, 2021YFC2501700), National High Level Hospital Clinical Research Funding (WX, 2022-PUMCH-D-006), the Non-profit Central Research Institute Fund of Chinese Academy of Medical Sciences (LC, 2023-PT320-10), and Young Elite Scientists Sponsorship Program by BAST (LC, No.BYESS2023171). Part of the study was supported by Merck Sharp & Dohme China, Hangzhou, China.

Declaration of Interest: All authors have no conflict of interest related to this publication.

Keywords: Deep learning, Prediction model, Fragility fracture, Osteoporosis, High-resolution peripheral quantitative CT (HR-pQCT), Volumetric bone mineral density, Bone microarchitecture

Suggested Citation

Chen, Fangyuan and Cui, Lijia and Jin, Qiao and Wu, Yushuo and Li, Jiaqi and Jiang, Yan and Liu, Wei and Chi, Yue and Jiajue, Ruizhi and Pang, Qianqian and Wang, Ou and Li, Mei and Xing, Xiaoping and Yu, Wei and Zhang, Xuegong and Xia, Weibo, DeepQCT: Predicting Fragility Fracture from High-Resolution Peripheral Quantitative CT Using Deep Learning. Available at SSRN: https://ssrn.com/abstract=4781321 or http://dx.doi.org/10.2139/ssrn.4781321

Fangyuan Chen (Contact Author)

Tsinghua University ( email )

Beijing, 100084
China

Lijia Cui

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Department of Endocrinology ( email )

1 Shuaifuyuan
Beijing, 100730
China

Qiao Jin

Tsinghua University - School of Medicine ( email )

Yushuo Wu

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital ( email )

1 Shuaifuyuan
Beijing, 100730
China

Jiaqi Li

Tsinghua University - Department of Automation ( email )

Yan Jiang

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital ( email )

1 Shuaifuyuan
Beijing, 100730
China

Wei Liu

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital ( email )

1 Shuaifuyuan
Beijing, 100730
China

Yue Chi

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital ( email )

1 Shuaifuyuan
Beijing, 100730
China

Ruizhi Jiajue

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital ( email )

1 Shuaifuyuan
Beijing, 100730
China

Qianqian Pang

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital ( email )

1 Shuaifuyuan
Beijing, 100730
China

Ou Wang

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital ( email )

Mei Li

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital ( email )

Xiaoping Xing

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Peking Union Medical College Hospital ( email )

1 Shuaifuyuan
Beijing, 100730
China

Wei Yu

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Department of Radiology ( email )

Beijing
China

Xuegong Zhang

Tsinghua University - School of Medicine ( email )

Weibo Xia

Chinese Academy of Medical Sciences & Peking Union Medical College (CAMS & PUMC) - Department of Endocrinology ( email )

1 Shuaifuyuan
Beijing, 100730
China
86(10)69155076 (Phone)
86(10)69155076 (Fax)