Search Results
Annual Review of Biomedical Data Science

Annual Review of Biomedical Data Science Logo
| Link to this page | Subscribe to this eJournal (requires login)

Viewing: 1 - 25 of 25 papers

1.

Biomolecular Data Resources: Bioinformatics Infrastructure for Biomedical Data Science

Annual Review of Biomedical Data Science, Vol. 2, pp. 199-222, 2019
Posted: 25 Jul 2019
Accepted Paper Series
European Bioinformatics Institute - European Molecular Biology Laboratory, European Bioinformatics Institute - European Molecular Biology Laboratory and European Bioinformatics Institute - European Molecular Biology Laboratory
2.

Discovering Pathway and Cell Type Signatures in Transcriptomic Compendia with Machine Learning

Annual Review of Biomedical Data Science, Vol. 2, pp. 1-17, 2019
Posted: 25 Jul 2019
Accepted Paper Series
University of Pennsylvania - Genomics and Computational Biology Graduate Group and Alex's Lemonade Stand Foundation - Childhood Cancer Data Lab
3.

Imaging, Visualization, and Computation in Developmental Biology

Annual Review of Biomedical Data Science, Vol. 2, pp. 223-251, 2019
Posted: 25 Jul 2019
Accepted Paper Series
University of California, Los Angeles (UCLA) - Department of Biomedical Engineering, University of California, Los Angeles (UCLA) - Department of Biomedical Engineering and University of California, Los Angeles (UCLA) - Translational Imaging Center
4.

Integrating Imaging and Omics: Computational Methods and Challenges

Annual Review of Biomedical Data Science, Vol. 2, pp. 175-197, 2019
Posted: 25 Jul 2019
Accepted Paper Series
European Molecular Biology Laboratory (EMBL)- Germany - Cell Biology and Biophysics Unit, European Molecular Biology Laboratory (EMBL)- Germany - Cell Biology and Biophysics Unit and European Molecular Biology Laboratory (EMBL)- Germany - Cell Biology and Biophysics Unit
5.

Molecular Heterogeneity in Large-Scale Biological Data: Techniques and Applications

Annual Review of Biomedical Data Science, Vol. 2, pp. 39-67, 2019
Posted: 25 Jul 2019
Accepted Paper Series
University of California, Los Angeles (UCLA) - Department of Molecular and Computational Biology, Stanford University - Department of Statistics, University of California, Los Angeles (UCLA) - Department of Molecular and Computational Biology and University of California, Los Angeles (UCLA) - Department of Molecular and Computational Biology
6.

Computational and Informatic Advances for Reproducible Data Analysis in Neuroimaging

Annual Review of Biomedical Data Science, Vol. 2, pp. 119-138, 2019
Posted: 25 Jul 2019
Accepted Paper Series
Stanford University - Department of Psychology, Stanford University - Department of Psychology and Parietal Team, Inria and NeuroSpin/CEA (Atomic Energy Commission)
7.

Connectivity Mapping: Methods and Applications

Annual Review of Biomedical Data Science, Vol. 2, pp. 69-92, 2019
Posted: 25 Jul 2019
Accepted Paper Series
Mount Sinai Health System - Department of Pharmacological Sciences and Mount Sinai Center for Bioinformatics, Mount Sinai Health System - Department of Pharmacological Sciences and Mount Sinai Center for Bioinformatics, Icahn School of Medicine at Mount Sinai - Department of Pharmacological Sciences, Mount Sinai Health System - Department of Pharmacological Sciences and Mount Sinai Center for Bioinformatics, Mount Sinai Health System - Department of Pharmacological Sciences and Mount Sinai Center for Bioinformatics, Mount Sinai Health System - Department of Pharmacological Sciences and Mount Sinai Center for Bioinformatics and Mount Sinai Health System - Department of Pharmacological Sciences and Mount Sinai Center for Bioinformatics
8.

Genomic Data Compression

Annual Review of Biomedical Data Science, Vol. 2, pp. 19-37, 2019
Posted: 25 Jul 2019
Accepted Paper Series
University of Illinois at Urbana-Champaign - Carl R. Woese Institute for Genomic Biology, Stanford University - Department of Electrical Engineering, Stanford University - Department of Electrical Engineering and University of Illinois at Urbana-Champaign - Department of Electrical and Computer Engineering
9.

RNA Sequencing Data: Hitchhiker's Guide to Expression Analysis

Annual Review of Biomedical Data Science, Vol. 2, pp. 139-173, 2019
Posted: 25 Jul 2019
Accepted Paper Series
Ghent University - Bioinformatics Institute Ghent, University of Zurich - Institute of Molecular Life Sciences, University of Zurich - Institute of Molecular Life Sciences, University of Zurich - Institute of Molecular Life Sciences, Ghent University - Bioinformatics Institute Ghent, University of North Carolina (UNC) at Chapel Hill - Department of Biostatistics, State University of New York (SUNY) - Department of Computer Science and University of Zurich - Institute of Molecular Life Sciences
10.

Scientific Discovery Games for Biomedical Research

Annual Review of Biomedical Data Science, Vol. 2, pp. 253-279, 2019
Posted: 25 Jul 2019
Accepted Paper Series
Stanford University - Department of Biochemistry, Stanford University - Department of Learning Sciences, Stanford University - Department of Bioengineering and Stanford University - Department of Bioengineering
11.

Sketching and Sublinear Data Structures in Genomics

Annual Review of Biomedical Data Science, Vol. 2, pp. 93-118, 2019
Posted: 25 Jul 2019
Accepted Paper Series
Carnegie Mellon University - Computational Biology Department, Johns Hopkins University - Department of Computer Science, State University of New York (SUNY) - Department of Computer Science and Carnegie Mellon University - Computational Biology Department
12.

A Census of Disease Ontologies

Annual Review of Biomedical Data Science, Vol. 1, pp. 305-331, 2018
Posted: 06 Feb 2019
Accepted Paper Series
Oregon Health and Science University, Oregon Health and Science University, Oregon Health and Science University, University of California, Berkeley - Lawrence Berkeley National Laboratory (Berkeley Lab), The Jackson Laboratory and Johns Hopkins University
13.

Computational Methods for Understanding Mass Spectrometry–Based Shotgun Proteomics Data

Annual Review of Biomedical Data Science, Vol. 1, pp. 207-234, 2018
Posted: 06 Feb 2019
Accepted Paper Series
Max Planck Society for the Advancement of the Sciences - Max Planck Institute of Biochemistry, Max Planck Society for the Advancement of the Sciences - Max Planck Institute of Biochemistry and Max Planck Society for the Advancement of the Sciences - Max Planck Institute of Biochemistry
14.

Data Science Issues in Studying Protein–RNA Interactions with CLIP Technologies

Annual Review of Biomedical Data Science, Vol. 1, pp. 235-261, 2018
Posted: 06 Feb 2019
Accepted Paper Series
Francis Crick Institute, Francis Crick Institute, Francis Crick Institute, Francis Crick Institute and University of Cambridge - MRC Laboratory of Molecular Biology
15.

Large-Scale Analysis of Genetic and Clinical Patient Data

Annual Review of Biomedical Data Science, Vol. 1, pp. 263-274, 2018
Posted: 06 Feb 2019
Accepted Paper Series
Pennsylvania State University
16.

Alignment-Free Sequence Analysis and Applications

Annual Review of Biomedical Data Science, Vol. 1, pp. 93-114, 2018
Posted: 06 Feb 2019
Accepted Paper Series
University of Southern California, University of Southern California, University of Southern California, University of Southern California, Xiamen University, University of Oxford and University of Southern California
17.

Big Data Approaches for Modeling Response and Resistance to Cancer Drugs

Annual Review of Biomedical Data Science, Vol. 1, pp. 1-27, 2018
Posted: 06 Feb 2019
Accepted Paper Series
Harvard University - T.H. Chan School of Public Health, Masssachusetts Institute of Technology and Harvard University - Broad Institute and Dana-Farber/Harvard Cancer Center - Center for Functional Cancer Epigenetics
18.

From Tissues to Cell Types and Back: Single-Cell Gene Expression Analysis of Tissue Architecture

Annual Review of Biomedical Data Science, Vol. 1, pp. 29-51, 2018
Posted: 06 Feb 2019
Accepted Paper Series
Wellcome Genome Campus, Wellcome Genome Campus and Wellcome Genome Campus
19.

Network Analysis as a Grand Unifier in Biomedical Data Science

Annual Review of Biomedical Data Science, Vol. 1, pp. 153-180, 2018
Posted: 06 Feb 2019
Accepted Paper Series
Yale University - Molecular Biophysics and Biochemistry, Yale University - Molecular Biophysics and Biochemistry, Yale University, Yale University - Molecular Biophysics and Biochemistry, Yale University, Yale University, Yale University - Molecular Biophysics and Biochemistry, Yale University - Molecular Biophysics and Biochemistry and Yale University - Molecular Biophysics and Biochemistry
20.

Opportunities and Challenges of Whole-Cell and -Tissue Simulations of the Outer Retina in Health and Disease

Annual Review of Biomedical Data Science, Vol. 1, pp. 131-152, 2018
Posted: 06 Feb 2019
Accepted Paper Series
University College London, Barcelona Institute of Science and Technology (BIST) - Centre for Genomic Regulation (CRG) and Tulane University, Department of Political Science
21.

Privacy Policy and Technology in Biomedical Data Science

Annual Review of Biomedical Data Science, Vol. 1, pp. 115-129, 2018
Posted: 06 Feb 2019
Accepted Paper Series
University of California, San Diego (UCSD) - School of Medicine, University of California, San Diego (UCSD) - School of Medicine, University of California, San Diego (UCSD), University of California, San Diego (UCSD) and University of California, San Diego (UCSD)
22.

Visualization of Biomedical Data

Annual Review of Biomedical Data Science, Vol. 1, pp. 275-304, 2018
Posted: 06 Feb 2019
Accepted Paper Series
Government of the Commonwealth of Australia - CSIRO (Commonwealth Scientific and Industrial Research Organisation), Garvan Institute of Medical Research, Garvan Institute of Medical Research, University of Technology Sydney (UTS), Queensland University of Technology, University of New South Wales (UNSW) - School of Computer Science & Engineering, Heidelberg Institute for Stem Cell Technology and Experimental Medicine (HI-STEM GmbH) - German Cancer Research Center (DKFZ), European Bioinformatics Institute, Heidelberg Institute for Stem Cell Technology and Experimental Medicine (HI-STEM GmbH) - German Cancer Research Center (DKFZ), University of Dundee - School of Life Sciences, Government of the Commonwealth of Australia - CSIRO (Commonwealth Scientific and Industrial Research Organisation) and University of Dundee - School of Life Sciences
23.

Advances in Electronic Phenotyping: From Rule-Based Definitions to Machine Learning Models

Annual Review of Biomedical Data Science, Vol. 1, pp. 53-68, 2018
Posted: 06 Feb 2019
Accepted Paper Series
Stanford University - Stanford Center for Biomedical Ethics (SCBE), Stanford University - Stanford Center for Biomedical Ethics (SCBE), Stanford University - Stanford Center for Biomedical Ethics (SCBE) and Stanford University - Center for Biomedical Informatics Research
24.

Deep Learning in Biomedical Data Science

Annual Review of Biomedical Data Science, Vol. 1, pp. 181-205, 2018
Posted: 06 Feb 2019
Accepted Paper Series
University of California, Irvine - School of Information and Computer Science
25.

Defining Phenotypes from Clinical Data to Drive Genomic Research

Annual Review of Biomedical Data Science, Vol. 1, pp. 69-92, 2018
Posted: 06 Feb 2019
Accepted Paper Series
Vanderbilt University - Medical Center, Vanderbilt University - Medical Center, Vanderbilt University - Medical Center and Vanderbilt University - Medical Center