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Jernej Ule

National Institute of Chemistry Slovenia

The Francis Crick Institute

1 Midland Road

London, NW1 1AT

United Kingdom

University of Cambridge - MRC Laboratory of Molecular Biology

Cambridge Biomedical Campus

Francis Crick Avenue

Cambridge , CB2 0QH

United Kingdom

SCHOLARLY PAPERS

8

DOWNLOADS

451

TOTAL CITATIONS

7

Scholarly Papers (8)

1.

Sequential Inverse Dysregulation of the RNA Helicases DDX3X and DDX3Y Facilitates MYC-Driven Lymphomagenesis

Number of pages: 68 Posted: 21 Jan 2020
Wellcome Trust and MRC Cambridge Stem Cell Institute, Wellcome Trust and MRC Cambridge Stem Cell Institute, Wellcome Trust and MRC Cambridge Stem Cell Institute, National University of Singapore (NUS) - Department of Haematology, The Babraham Institute, Wellcome Trust and MRC Cambridge Stem Cell Institute, University of Cambridge - Division of Cellular and Molecular Pathology, St. James’s Institute of Oncology - Haematological Malignancy Diagnostic Service, University of York - Epidemiology and Cancer Statistics Group, National University of Singapore (NUS) - Department of Haematology, Goethe University Frankfurt - Department of Medicine II, Hematology/Oncology, Wellcome Trust and MRC Cambridge Stem Cell Institute, The Francis Crick Institute, Nanyang Technological University (NTU) - School of Biological Sciences, Teesside University - School of Health & Life Sciences, Teesside University - School of Health & Life Sciences, University of Cambridge - Division of Cellular and Molecular Pathology, University of Cambridge - Division of Cellular and Molecular Pathology, National University of Singapore (NUS) - Department of Clinical Translational Research, Addenbrooke’s Hospital - Department of Paediatric Oncology, Nanyang Technological University (NTU) - School of Biological Sciences, Wellcome Trust Sanger Institute, St. James’s Institute of Oncology - Haematological Malignancy Diagnostic Service, Wellcome Genome Campus - Cancer Genome Project, Teesside University - School of Health & Life Sciences, University of Cambridge - Division of Cellular and Molecular Pathology, National Institute of Chemistry Slovenia, University of York - Epidemiology and Cancer Statistics Group, St. James’s Institute of Oncology - Haematological Malignancy Diagnostic Service, Goethe University Frankfurt - Department of Medicine II, Hematology/Oncology, The Babraham Institute - Immunology Programme, University of Cambridge - Division of Cellular and Molecular Pathology, University of Cambridge - MRC Cancer Unit and Wellcome Trust and MRC Cambridge Stem Cell Institute
Downloads 175 (431,126)
Citation 1

Abstract:

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Lymphoma, Translation, Cancer, MYCDDX3X

2.

Lactate Potentiates Differentiation and Expansion of Cytotoxic T Cells

Number of pages: 44 Posted: 28 Jun 2019
Karolinska Institutet - Department of Cell and Molecular Biology, Karolinska Institutet - Department of Cell and Molecular Biology, Karolinska Institutet - Department of Cell and Molecular Biology, The Francis Crick Institute, University of Cambridge, Karolinska Institutet - Department of Cell and Molecular Biology, University of Cambridge, Karolinska Institutet - Department of Cell and Molecular Biology, Karolinska Institutet - Department of Cell and Molecular Biology, Karolinska Institutet - Department of Cell and Molecular Biology, Karolinska Institutet - Department of Microbiology, Tumor and Cell Biology (MTC), Karolinska Institutet - Department of Microbiology, Tumor and Cell Biology (MTC), National Institute of Chemistry Slovenia, Karolinska Institutet - Department of Oncology-Pathology and Karolinska Institutet - Department of Cell and Molecular Biology
Downloads 59 (970,490)
Citation 3

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Exercise, immunotherapy, Lactate, Metabolism

3.

A Moonlighting Function of Aldh18a1 Supports Pausing RNA Polymerase II in Promoter-Proximal Regions

Number of pages: 34 Posted: 19 Apr 2022
The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, German Cancer Research Center (DKFZ) - Division of Proteomics of Stem Cells and Cancer,, National Institute of Chemistry Slovenia and The Francis Crick Institute
Downloads 55 (1,010,164)

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ChIP-SICAP, Proteomics, Pol II promoter proximal pausing, Aldh18a1

4.

Integrative Profiling of Condensation-Prone RNAs During Early Development

Number of pages: 42 Posted: 12 Feb 2025
National Institute of Chemistry Slovenia, National Institute of Chemistry Slovenia, The Francis Crick Institute, Jožef Stefan Institute, Jožef Stefan Institute, The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, National Institute of Chemistry Slovenia, National Institute of Chemistry Slovenia and Independent
Downloads 50 (1,063,489)

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Condensation-prone RNAs, semi-extractability, OOPS, RIC-seq, RNA-RNA interactions, deep learning, RNA-protein networks, phase separation, condensation

5.

Cross-Regulation Between TDP-43 and Paraspeckles Promotes Pluripotency-Differentiation Transition

Number of pages: 77 Posted: 05 Apr 2018
Helmholtz Association of German Research Centres - Institute of Stem Cell Research (ISF), University of Cambridge - MRC Laboratory of Molecular Biology, Helmholtz Association of German Research Centres - Institute of Stem Cell Research (ISF), Helmholtz Association of German Research Centres - Institute of Stem Cell Research (ISF), Helmholtz Association of German Research Centres - Institute of Stem Cell Research (ISF), Harvard University - Department of Stem Cell and Regenerative Biology, Helmholtz Association of German Research Centres - Institute of Stem Cell Research (ISF), Jožef Stefan Institute - Department of Biotechnology, Helmholtz Association of German Research Centres - Research Unit Protein Science (PROT), University of Zurich - Institute of Molecular Life Sciences, Harvard University - Department of Stem Cell and Regenerative Biology, National Institute of Chemistry Slovenia and Helmholtz Association of German Research Centres - Institute of Stem Cell Research (ISF)
Downloads 43 (1,145,425)
Citation 2

Abstract:

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6.

Subcytoplasmic Location of Translation Controls Protein Output

Number of pages: 69 Posted: 15 Nov 2022
Memorial Sloan Kettering Cancer Center - Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center - Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center - Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center - Cancer Biology and Genetics Program, The Francis Crick Institute, National Institute of Chemistry Slovenia and Memorial Sloan Kettering Cancer Center - Cancer Biology and Genetics Program
Downloads 36 (1,249,711)

Abstract:

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Cytoplasmic organization, spatial regulation, mRNA localization, unenclosed cytoplasmic compartments, subdomains of the endoplasmic reticulum, ER subdomains, translation environment, regulation of protein expression, condensates, rough endoplasmic reticulum membrane, 3′UTRs, RNA-binding proteins, CLIP analysis, TIS11B, TIAL1, LARP4B

7.

Subcellular mRNA Localization Regulates Ribosome Biogenesis In Migrating Cells

Number of pages: 44 Posted: 28 Jan 2020
Queen Mary University of London - Centre for Cancer Cell and Molecular Biology, Queen Mary University of London - Centre for Cancer Cell and Molecular Biology, The Francis Crick Institute, Queen Mary University of London - Centre for Cancer Cell and Molecular Biology, University of Oxford - Department of Oncology, Queen Mary University of London - Centre for Tumour Biology, University of Oxford - Department of Oncology, National Institute of Chemistry Slovenia and Queen Mary University of London - Centre for Cancer Cell and Molecular Biology
Downloads 33 (1,277,121)
Citation 1

Abstract:

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RNA localization, local translation, ribosome biogenesis, mTORC1, LARP1, LARP6, translation, Cell Migration, invasion, EMT

8.

Data Science Issues in Studying Protein–RNA Interactions with CLIP Technologies

Annual Review of Biomedical Data Science, Vol. 1, pp. 235-261, 2018
Posted: 06 Feb 2019
The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute and National Institute of Chemistry Slovenia

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