University of Oslo - Department of Biostatistics, University of Birmingham - Institute of Microbiology and Infection, Department of Biostatistics, University of Oslo, Parasites and Microbes, Wellcome Sanger Institute, Faculty of Medicine, School of Public Health, Imperial College, Department of Biostatistics, University of Oslo, Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, Norwegian National Advisory Unit on Detection of Antimicrobial Resistance, Department of Microbiology and Infection Control, University Hospital of North Norway, Norwegian National Advisory Unit on Detection of Antimicrobial Resistance, Department of Microbiology and Infection Control, University Hospital of North Norway, Laboratory of Microbiology, Department of Medical Biochemistry, Oslo University Hospital Radiumhospitalet, Department of Microbiology, Division of Laboratory Medicine, Oslo University Hospital, Department of Microbiology, Førde General Hospital, Førde Health Trust, Department of Laboratory Medicine, Levanger Hospital, Nord-Trøndelag Hospital Trust, Department of Microbiology, Nordland Hospital, Department of Microbiology, Haukeland University Hospital, Department of Medical Microbiology, Stavanger University Hospital, Department of Microbiology, Vestfold Hospital, Department of Microbiology Moere and Romsdal Hospital Trust, Institute of Clinical Medicine, Faculty of Medicine, University of Oslo, Department of Microbiology and Infection Control, University Hospital of North Norway, Centre for Laboratory Medicine, Sections for Microbiology, Østfold Hospital, Department of Medical Microbiology, Sørlandet Hospital, Department of Microbiology, Akershus University Hospital, Wellcome Sanger Institute - Parasites and Microbes, Imperial College London - Department of Infectious Disease, Wellcome Genome Campus - Infection Genomics, Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway and Wellcome Genome Campus - Parasites and Microbes

Wellcome Genome Campus - Parasites and Microbes, Wellcome Genome Campus - Parasites and Microbes, New York University (NYU) - Grossman School of Medicine, Imperial College London - Department of Infectious Disease, Wellcome Genome Campus - Parasites and Microbes, Wellcome Genome Campus - Parasites and Microbes, Wellcome Genome Campus - Parasites and Microbes, Helsinki Institute for Information Technology, Wellcome Genome Campus - Parasites and Microbes, Universidad Peruana Cayetano Heredia, The University of Hong Kong - Queen Mary Hospital, National Health Laboratory Services (NHLS) - Centre for Respiratory Diseases and Meningitis, University of Malawi - Malawi-Liverpool-Wellcome Trust Clinical Research Programme, London School of Hygiene & Tropical Medicine - Medical Research Council Unit: The Gambia, Ben-Gurion University of the Negev - Faculty of Health Science, University of the Witwatersrand, University of the Witwatersrand - Vaccines and Infectious Diseases Analytics Research Unit, Emory University - Rollins School of Public Health, University of Edinburgh, London School of Hygiene & Tropical Medicine - Medical Research Council Unit: The Gambia, Ben-Gurion University of the Negev - Faculty of Health Science, Emory University - Rollins School of Public Health, National Health Laboratory Services (NHLS) - Centre for Respiratory Diseases and Meningitis, Government of the United States of America - Centers for Disease Control and Prevention (CDC), Emory University - Rollins School of Public Health, Wellcome Sanger Institute - Parasites and Microbes and Independent

National Health Laboratory Services (NHLS) - National Institute for Communicable Diseases, National Health Laboratory Services (NHLS) - National Institute for Communicable Diseases, University of Oslo - Department of Biostatistics, Government of the United States of America - Centers for Disease Control and Prevention (CDC), Government of the United States of America - Centers for Disease Control and Prevention (CDC), Government of the United States of America - Centers for Disease Control and Prevention (CDC), National Health Laboratory Services (NHLS) - Centre for Respiratory Diseases and Meningitis, National Health Laboratory Services (NHLS) - Centre for Respiratory Diseases and Meningitis, University of the Witwatersrand - South African Medical Research Council, Wellcome Sanger Institute, National Health Laboratory Services (NHLS) - National Institute for Communicable Diseases, National Health Laboratory Services (NHLS) - National Institute for Communicable Diseases, National Institute For Communicable Diseases Of South Africa - Division of Public Health Surveillance and Response, National Health Laboratory Services (NHLS) - National Institute for Communicable Diseases, Government of the United States of America - Centers for Disease Control and Prevention (CDC), National Center for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, Wellcome Sanger Institute - Parasites and Microbes, National Health Laboratory Services (NHLS) - Centre for Respiratory Diseases and Meningitis, Wellcome Sanger Institute - Parasites and Microbes, University of the Witwatersrand - Department of Clinical Microbiology and Infectious Diseases and University of the Witwatersrand - Department of Clinical Microbiology and Infectious Diseases

University of Oslo - Department of Biostatistics, University of Oslo, University of Oxford, University of Oslo, Mahidol University, Mahidol University, University of Oxford, Wellcome Sanger Institute - Parasites and Microbes, Imperial College London - MRC Centre for Global Infectious Disease Analysis, University of Oxford - Centre for Tropical Medicine & Global Health and University of Oslo - Department of Biostatistics

New York University (NYU) - Department of Microbiology, University of Amsterdam - Department of Neurology, University of Amsterdam - Department of Neurology, Wellcome Genome Campus - Infection Genomics, National Institute for Public Health and the Environment (RIVM) - Centre for Infectious Disease Control, Imperial College London - Department of Infectious Disease, Wellcome Genome Campus - Infection Genomics, National Institute for Public Health and the Environment (RIVM) - Centre for Infectious Disease Control, National Institute for Public Health and the Environment (RIVM) - Centre for Infectious Disease Control, Wellcome Genome Campus - Infection Genomics, National Institute for Public Health and the Environment (RIVM) - Centre for Infectious Disease Control, National Institute for Public Health and the Environment (RIVM) - Centre for Infectious Disease Control, Utrecht University - Department of Pediatric Immunology and Infectious Diseases, University of Amsterdam - Department of Biostatistics, Utrecht University - Department of Neurology, Utrecht University - Department of Neurology, Utrecht University - Department of Neurology, Statens Serums Institut - Department of Microbiological Surveillance and Research, University of Copenhagen - Department of Infectious Diseases, Wageningen University and Research (WUR) - Department of Human Nutrition, University of Amsterdam - Amsterdam Public Health Research Institute, University of Amsterdam - Amsterdam Public Health Research Institute, Bispebjerg and Frederiksberg Hospitals - Center for Clinical Research and Disease Prevention, University of Copenhagen - Section of Metabolic Genetics, University of Southern Denmark - Institute of Clinical Research, University of Oxford - Wellcome Centre for Human Genetics, University of Oxford - Wellcome Trust Centre for Human Genetics, University of Oxford - Wellcome Trust Centre for Human Genetics, University of the Witwatersrand, University of the Witwatersrand, New York University (NYU) - Department of Microbiology, Wellcome Genome Campus - Infection Genomics, National Health Laboratory Services (NHLS) - National Institute for Communicable Diseases, University of Copenhagen - Department of Infectious Diseases, National Health Laboratory Services (NHLS) - Centre for Respiratory Diseases and Meningitis, University of Amsterdam - Netherlands Reference Laboratory for Bacterial Meningitis, University of Amsterdam - Department of Neurology, Wellcome Genome Campus - Infection Genomics, Wellcome Sanger Institute - Parasites and Microbes and University of Amsterdam - Department of Neurology

Wellcome Sanger Institute - Parasites and Microbes, University of Cambridge - Department of Genetics, National Health Laboratory Services (NHLS) - Division of Public Health Surveillance and Response, University of the Witwatersrand - Vaccines and Infectious Diseases Analytics Research Unit, University of the Witwatersrand - Department of Clinical Microbiology and Infectious Diseases, Wellcome Sanger Institute - Parasites and Microbes, National Center for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, University of the Witwatersrand - Vaccines and Infectious Diseases Analytics Research Unit, University of the Witwatersrand - Department of Clinical Microbiology and Infectious Diseases, Wellcome Sanger Institute - Parasites and Microbes and University of Cambridge - Department of Genetics