Derrick W. Crook

University of Oxford - Nuffield Department of Medicine

Old Road Campus

Roosevelt Drive

Oxford, OX3 7FZ

United Kingdom

University of Oxford - John Radcliffe Hospital

Oxford, Oxfordshire, England

United Kingdom

  • University of Oxford - John Radcliffe Hospital

SCHOLARLY PAPERS

9

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756

SSRN CITATIONS

3

CROSSREF CITATIONS

0

Scholarly Papers (9)

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1.

The 2021 WHO Catalogue of Mycobacterium Tuberculosis Complex Mutations Associated with Drug Resistance: A New Global Standard for Molecular Diagnostics

Number of pages: 29 Posted: 21 Sep 2021
Timothy M. Walker, Paolo Miotto, Claudio U. Köser, Philip William Fowler, Jeff Knaggs, Zamin Iqbal, Martin Hunt, Leonid Chindelevitch, Maha Farhat, Daniela Cirillo, Iñaki Comas, James E. Posey, Shaheed Vally Omar, Timothy E. A. Peto, Anita Suresh, Swapna Uplekar, Sacha Laurent, Rebecca Colman, Carl-Michael Nathanson, Matteo Zignol, Ann Sarah Walker, The CRyPTIC Consortium, The Seq&Treat Consortium, Derrick W. Crook, Nazir Ismail and Timothy C. Rodwell
University of Oxford - Nuffield Department of Medicine, Università Vita-Salute San Raffaele - IRCCS San Raffaele Scientific Institute, University of Cambridge - Department of Genetics, University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital, University of Oxford - Nuffield Department of Medicine, European Bioinformatics Institute (EMBL-EBI), University of Oxford - Nuffield Department of Medicine, Imperial College London, Harvard University - Harvard Medical School, Università Vita-Salute San Raffaele - IRCCS San Raffaele Scientific Institute, Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER) - Tuberculosis Genomics Unit, Centers for Disease Control and Prevention (CDC), National Center for HIV/AIDS, Viral Hepatitis, STD, and TB Prevention, Division of Tuberculosis Elimination, National Health Laboratory Services (NHLS) - National Institute for Communicable Diseases, University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital, Foundation for Innovative New Diagnostics (FIND), Foundation for Innovative New Diagnostics (FIND), Foundation for Innovative New Diagnostics (FIND), Foundation for Innovative New Diagnostics (FIND), World Health Organization (WHO) - Global Tuberculosis Programme, World Health Organization (WHO) - Global Tuberculosis Programme, University of Oxford - Nuffield Department of Medicine, Independent, Independent, University of Oxford - Nuffield Department of Medicine, World Health Organization (WHO) - Global Tuberculosis Programme and University of California, San Diego (UCSD)
Downloads 317 (185,534)
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Mycobacterium tuberculosis, drug resistance, whole genome sequencing, catalogue, World Health Organization

2.

Transmission of pre-XDR and XDR-TB in the Mumbai Metropolitan Region, India

Number of pages: 34 Posted: 04 Feb 2021
Viola Dreyer, Ayan Mandal, Prachi Dev, Matthias Merker, Ivan Barilar, Christian Utpatel, Kayzad Nilgiriwala, Camilla Rodrigues, Derrick W. Crook, The CRyPTIC Consortium, Nerges Mistry and Stefan Niemann
Research Center Borstel - Molecular and Experimental Mycobacteriology, The Foundation for Medical Research, The Foundation for Medical Research, Research Center Borstel - Molecular and Experimental Mycobacteriology, Research Center Borstel - Molecular and Experimental Mycobacteriology, Research Center Borstel - Molecular and Experimental Mycobacteriology, The Foundation for Medical Research, P.D. Hinduja Hospital and Medical Research Centre - Department of Microbiology, University of Oxford - Nuffield Department of Medicine, Independent, The Foundation for Medical Research and Research Center Borstel - Molecular and Experimental Mycobacteriology
Downloads 91 (542,810)

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3.

Mycobacterium abscessus Genomic Clusters Span Geography and Patient Groups

Number of pages: 28 Posted: 19 Jan 2021
Samuel Lipworth, Natasha Hough, Natasha Weston, Berit Muller-Pebody, Nick Phin, Richard Myers, Stephen Chapman, William Flight, Eliza Alexander, E. Grace Smith, Esther Robinson, Timothy E. A. Peto, Derrick W. Crook, A. Sarah Walker, Susan Hopkins, David William Eyre and Timothy M. Walker
University of Oxford - Nuffield Department of Medicine, Oxford University Hospitals NHS Foundation Trust, National Mycobacterial Reference Service- Central and North, Public Health England, Tuberculosis, Acute Respiratory, Gastrointestinal, Emerging/Zoonotic Infections and Travel Migrant Health Division, (T.A.R.G.E.T), National Infection Service, Public Health England, Tuberculosis, Acute Respiratory, Gastrointestinal, Emerging/Zoonotic Infections and Travel Migrant Health Division, (T.A.R.G.E.T), National Infection Service, Public Health England, Government of the United Kingdom - Public Health England, Oxford University Hospitals NHS Foundation Trust, Oxford University Hospitals NHS Foundation Trust, Government of the United Kingdom - Public Health England, Government of the United Kingdom - Public Health England, Government of the United Kingdom - Public Health England, University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital, University of Oxford - Nuffield Department of Medicine, University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital, University of Oxford - NIHR Health Protection Research Unit in Healthcare Associated Infection and Antimicrobial Resistance, Oxford University Hospitals NHS Foundation Trust and University of Oxford - Nuffield Department of Medicine
Downloads 73 (617,462)

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4.

Whole Genome Sequencing for Surveillance of Tuberculosis Drug Resistance in China: Based on a Cross-Sectional Surveillance Study

Number of pages: 17 Posted: 12 Apr 2021
Dongxin Liu, Fei Huang, Guoliang Zhang, Wencong He, Timothy M. Walker, Xichao Ou, Ping He, Bing Zhao, Baoli Zhu, Fei Liu, Zhiyuan Li, Chunfa Liu, Hui Xia, Shengfen Wang, Yang Zhou, Lei Liu, Derrick W. Crook and Yanlin Zhao
Chinese Center for Disease Control and Prevention (China CDC) - National Center for Tuberculosis Control and Prevention, Chinese Center for Disease Control and Prevention (China CDC) - National Center for Tuberculosis Control and Prevention, Southern University of Science and Technology - National Clinical Research Center for Infectious Diseases, Chinese Center for Disease Control and Prevention (China CDC), University of Oxford - Nuffield Department of Medicine, Chinese Center for Disease Control and Prevention (China CDC) - National Center for Tuberculosis Control and Prevention, Chinese Center for Disease Control and Prevention (China CDC), Chinese Center for Disease Control and Prevention (China CDC), Chinese Academy of Sciences (CAS) - CAS Key Laboratory of Pathogenic Microbiology and Immunology, Chinese Academy of Sciences (CAS) - Institute of Microbiology, Chinese Academy of Sciences (CAS) - Institute of Microbiology, Chinese Center for Disease Control and Prevention (China CDC), Chinese Center for Disease Control and Prevention (China CDC), Chinese Center for Disease Control and Prevention (China CDC) - National Center for Tuberculosis Control and Prevention, Chinese Center for Disease Control and Prevention (China CDC), Southern University of Science and Technology - Pulmonary Diseases Department Two, University of Oxford - Nuffield Department of Medicine and Chinese Center for Disease Control and Prevention (China CDC) - National Center for Tuberculosis Control and Prevention
Downloads 64 (661,365)

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Whole genome sequencing, tuberculosis, drug-resistant, surveillance, minimum inhibitory concentration

5.

Reducing Expectations for Antibiotics in Primary Care: A Randomised Experiment to Test the Response to Fear-Based Messages About Antimicrobial Resistance

Number of pages: 26 Posted: 21 Aug 2019
Sarah Wordsworth, Laurence S. J. Roope, Sarah Tonkin-Crine, Natalie Herd, Susan Michie, Koen B. Pouwels, Enrique Castro-Sanchez, Anna Sallis, Susan Hopkins, Julie V. Robotham, Derrick W. Crook, Timothy E. A. Peto, Michele Peters, Christopher C. Butler and A. Sarah Walker
University of Oxford - Health Economics Research Centre (HERC), University of Oxford - Health Economics Research Centre (HERC), Imperial College London - NIHR Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance, University College London - Centre for Behaviour Change (CBC), University College London - Centre for Behaviour Change (CBC), University of Oxford - Health Economics Research Centre (HERC), University of Oxford - NIHR Health Protection Research Unit in Healthcare Associated Infection and Antimicrobial Resistance, Government of the United Kingdom - Public Health England, University of Oxford - NIHR Health Protection Research Unit in Healthcare Associated Infection and Antimicrobial Resistance, University of Oxford - NIHR Health Protection Research Unit in Healthcare Associated Infection and Antimicrobial Resistance, University of Oxford - Nuffield Department of Medicine, University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital, University of Oxford - Nuffield Department of Population Health, University of Oxford - Department of Primary Care Health Sciences and University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital
Downloads 60 (682,366)

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6.

Risk Factors Associated with Carbapenemase-Producing Enterobacterales (CPE) Positivity in the Hospital Wastewater Environment

Number of pages: 40 Posted: 23 Apr 2020
Stacy Park, Hardik Parikh, Kasi Vegesana, Nicole Stoesser, Katie E. Barry, Shireen M. Kotay, Sarah Dudley, Timothy E.A. Peto, Derrick W. Crook, A. Sarah Walker and Amy J. Mathers
University of Virginia - Division of Infectious Diseases and International Health, University of Virginia - Division of Infectious Diseases and International Health, University of Virginia - Division of Infectious Diseases and International Health, University of Oxford - Nuffield Department of Medicine, University of Virginia - Division of Infectious Diseases and International Health, University of Virginia - Division of Infectious Diseases and International Health, University of Virginia - School of Medicine, University of Oxford - Nuffield Department of Medicine, University of Oxford - Nuffield Department of Medicine, University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital and University of Virginia - Division of Infectious Diseases and International Health
Downloads 52 (728,058)

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carbapenemase-producing Enterobacterales; carbapenem-resistant Enterobacterales; nosocomial infections; environmental reservoir; sink; toilet

7.

M. tuberculosis Microvariation Is Common and Is Associated with Transmission: Analysis of Three Years Prospective Universal Sequencing in England

Number of pages: 40 Posted: 28 Jun 2019
David Wyllie, Trien Do, Richard Myers, Vlad Nikolayevskyy, Derrick W. Crook, Eliza Alexander, Esther Robinson, A. Sarah Walker, Colin Campbell and E. Grace Smith
Imperial College London - NIHR Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance, Imperial College London - NIHR Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance, Government of the United Kingdom - Public Health England, Government of the United Kingdom - Public Health England, University of Oxford - Nuffield Department of Medicine, Government of the United Kingdom - Public Health England, Government of the United Kingdom - Public Health England, University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital, Government of the United Kingdom - Public Health England and Government of the United Kingdom - Public Health England
Downloads 43 (787,356)

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M. tuberculosis, Transmission, Mixed infection

8.

Mycobacterium Tuberculosis Transmission in Birmingham, UK, 2009-19: A Prospective Observational Study

Number of pages: 25 Posted: 14 Dec 2021
Timothy M. Walker, Marc Choisy, Martin Dedicoat, Philip G. Drennan, David Wyllie, Fan Yang-Turner, Derrick W. Crook, Esther Robinson, Ann Sarah Walker, E. Grace Smith and Timothy E. A. Peto
University of Oxford - Nuffield Department of Medicine, Hospital of Tropical Diseases - Oxford University Clinical Research Unit, University Hospitals Birmingham NHS Foundation Trust, University of Oxford, UK Health Security Agency, University of Oxford, University of Oxford - Nuffield Department of Medicine, UK Health Security Agency - TB Unit and National Mycobacterial Reference Service, University of Oxford - Nuffield Department of Medicine, UK Health Security Agency - TB Unit and National Mycobacterial Reference Service and University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital
Downloads 28 (909,041)
Citation 2

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Mycobacterium tuberculosis, epidemiology, whole genome sequencing, seasonality, transmission

9.

Prediction of Pyrazinamide Resistance in Mycobacterium Tuberculosis Using Structure-Based Machine Learning Approaches

Number of pages: 37 Posted: 22 May 2019
Joshua J. Carter, Timothy M. Walker, A. Sarah Walker, Michael G. Whitfield, Glenn P. Morlock, Timothy E. A. Peto, James E. Posey, Derrick W. Crook and Philip William Fowler
University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital, University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital, University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital, Stellenbosch University, Faculty of Medicine and Health Sciences, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, Division of Molecular Biology and Human Genetics, SAMRC Centre, Centers for Disease Control and Prevention (CDC), National Center for HIV/AIDS, Viral Hepatitis, STD, and TB Prevention, Division of Tuberculosis Elimination, University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital, Centers for Disease Control and Prevention (CDC), National Center for HIV/AIDS, Viral Hepatitis, STD, and TB Prevention, Division of Tuberculosis Elimination, University of Oxford - Nuffield Department of Medicine and University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital
Downloads 28 (909,041)
Citation 3

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tuberculosis, antimicrobial resistance, pyrazinamide, prediction, Machine Learning, protein structure, Mycobacterium tuberculosis