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Patrick S. G. Chain

Government of the United States of America - Los Alamos National Laboratory

SCHOLARLY PAPERS

6

DOWNLOADS

259

TOTAL CITATIONS

0

Scholarly Papers (6)

1.

Pangeneric Analyses Reveal the Divergent Genome Evolution and Ecologies between Morels and Truffles in the Morchellaceae

Number of pages: 54 Posted: 16 Apr 2025
Michigan State University, Okinawa Institute of Science and Technology Graduate University (OIST), University of California, Berkeley - Department of Energy Joint Genome Institute, Sichuan Academy of Agricultural Sciences, Lawrence Berkeley National Lab - US Department of Energy (DOE) Joint Genome Institute (JGI), Government of the United States of America - Los Alamos National Laboratory, Michigan State University, Michigan State University, University of Lorraine, University of Lorraine, Université Aix Marseille, Michigan State University, University of Lorraine, Uppsala University, Uppsala University, University of Neuchatel, Government of the United States of America - Los Alamos National Laboratory, Lawrence Berkeley National Lab - US Department of Energy (DOE) Joint Genome Institute (JGI), University of California, Berkeley - Department of Energy Joint Genome Institute, Government of the United States of America - Joint Genome Institute, Lawrence Berkeley National Lab - US Department of Energy (DOE) Joint Genome Institute (JGI), Lawrence Berkeley National Lab - US Department of Energy (DOE) Joint Genome Institute (JGI), US Department of Energy Joint Genome Institute, University of California, Berkeley - Department of Energy Joint Genome Institute, University of California, Berkeley - Department of Energy Joint Genome Institute, University of California, Berkeley - Department of Energy Joint Genome Institute, University of California, Berkeley, Sorbonne Université, Independent, University of Neuchatel, University of Neuchatel, Government of the United States of America - Los Alamos National Laboratory, Lawrence Berkeley National Lab - US Department of Energy (DOE) Joint Genome Institute (JGI), University of Lorraine and Independent
Downloads 88 (765,566)

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Ascomycota, biotrophy, genome evolution, lifestyle, fungal evolution, Morchellaceae, Pezizomycetes, phylogeny, sex genes

2.

Identification of Lineage Associated Virulence Genes in Shiga Toxin-Producing Escherichia Coli by Pangenome Analysis

Number of pages: 37 Posted: 09 Dec 2021
Michelle Carter, Nicole Laniohan, Chien-Chi Lo and Patrick S. G. Chain
affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN and Government of the United States of America - Los Alamos National Laboratory
Downloads 43 (1,145,425)

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Shiga toxin-producing Escherichia coli, Pangenome, Accessory genome, Pathogenicity Islands, Genomic Islands, Shiga toxins, virulence genes

3.

Diversity of Fungal Microbiome Obtained from Plant Rhizoplanes

Number of pages: 42 Posted: 03 Mar 2023
affiliation not provided to SSRN, affiliation not provided to SSRN, Government of the United States of America - Los Alamos National Laboratory, affiliation not provided to SSRN, Government of the United States of America - Los Alamos National Laboratory, Government of the United States of America - Los Alamos National Laboratory and affiliation not provided to SSRN
Downloads 42 (1,157,785)

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fungal highways, endobacteria, exo-bacteria, fungal microbiome, bacteria-fungi interactions, Network Analysis.

4.

DNA Viruses from Different Stages of a Wastewater Treatment Plant in Southwest Ohio

Number of pages: 31 Posted: 27 May 2025
Government of the United States of America - Los Alamos National Laboratory, Government of the United States of America - Environmental Protection Agency (EPA), US Environmental Protection Agency, Government of the United States of America - Los Alamos National Laboratory, Government of the United States of America - Environmental Protection Agency (EPA) and Government of the United States of America - Los Alamos National Laboratory
Downloads 30 (1,318,317)

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wastewater, metagenomics, virus, ssDNA virus, MDA

5.

A Playbook for Harmonization of Standards for Emergent Viral Pathogens

Number of pages: 21 Posted: 18 Oct 2024
Brigham and Women’s Hospital and Harvard Medical School - Division of Rheumatology, Inflammation, and ImmunityUniversity of Cape Town (UCT) - South African Tuberculosis Vaccine Initiative, Western University of Health Sciences, Stanford University, Stanford University, Asuragen, Inc., Imperial College London - London BiofoundryImperial College London - Section of Structural and Synthetic Biology, Imperial College London - London Biofoundry, GBD Gesellschaft für Biotechnologische Diagnostik mbH, Institut für Qualitätssicherung in der Virusdiagnostik - IQVD GmbH, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, Thermo Fisher Scientific, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, Government of the United States of America - Los Alamos National Laboratory, Government of the United States of America - Los Alamos National Laboratory, Government of the United States of America - Los Alamos National Laboratory, affiliation not provided to SSRN, Harvard University - Department of Pathology, Mayo Clinic, Mayo Clinic, Mayo Clinic, Medical University of South Carolina, National Institute of Biology, National Institute of Biology, Government of the United States of America - National Institute of Standards and Technology (NIST), affiliation not provided to SSRN, affiliation not provided to SSRN, LGC, Ltd., affiliation not provided to SSRN, affiliation not provided to SSRN, Stanford University - Department of Pathology, affiliation not provided to SSRN, affiliation not provided to SSRN, Weill Cornell Medicine - Department of Physiology, Biophysics, and Systems Biology, Stanford University, Stanford University - Chan Zuckerberg Biohub, affiliation not provided to SSRN, University of California, Berkeley and affiliation not provided to SSRN
Downloads 28 (1,345,526)

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diagnostics, Playbook, Harmonization, PCR, International Standard

6.

Tripartite Interactions Between Morchella spp., Pseudomonas koreensis And Acanthamoeba castellanii Reveal a Beneficial Fungal-Amoebal Association

Number of pages: 19 Posted: 27 Feb 2024
University of Neuchatel, Government of the United States of America - Los Alamos National Laboratory, Government of the United States of America - Los Alamos National Laboratory, University of Neuchatel and University of Neuchatel
Downloads 28 (1,345,526)

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