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Anmar Khadra

McGill University - Department of Physiology

SCHOLARLY PAPERS

6

DOWNLOADS

180

TOTAL CITATIONS

0

Scholarly Papers (6)

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1.

Excitable Dynamics in a Molecularly-Explicit Model of Cell Motility: Mixed-Mode Oscillations and Beyond

Number of pages: 22 Posted: 06 Dec 2022
Lucie Plazen and Anmar Khadra
McGill University - Department of Mathematics & Statistics and McGill University - Department of Physiology
Downloads 35 (1,263,436)

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Rho family of GTPases, Cellular polarity, mathematical model, hysteresis and bistability, wavepinning, mixed-mode oscillations, relaxation oscillations, slow-fast analysis, cellular potts model, migration patterns

2.

Theoretical Quantification of the Polyvalent Binding of Nanoparticles Coated with Peptide-Major Histocompatibility Complex to T Cell Receptor-Nanoclusters

Number of pages: 35 Posted: 01 Oct 2022
Manuela Pineros-Rodriguez, Louis Richez and Anmar Khadra
McGill University - Department of Mathematics & Statistics, McGill University and McGill University - Department of Physiology
Downloads 34 (1,290,922)

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Polyvalent biding, pMHC-coated nanoparticles, T cell receptors, multiscale model, dissociationconstant, Gibbs free energy, insertion probability, TCR nanoclusters, Density of bound and triggered TCRs, cooperativity.

3.

ElecFeX: A User-Friendly Toolbox for Efficient Feature Extraction from Single-Cell Electrophysiological Recordings

Number of pages: 50 Posted: 01 Sep 2023
Xinyue Ma, Loïs S. Miraucourt, Haoyi Qiu, Mengyi Xu, Reza Sharif-Naeini and Anmar Khadra
McGill University, McGill University - Cell Information Systems Group, McGill University - Cell Information Systems Group, McGill University, McGill University and McGill University - Department of Physiology
Downloads 33 (1,304,549)

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Single-cell electrophysiology, Dataset, MATLAB, Toolbox, Open-source, Current-clamp recordings, Electrophysiological feature extraction, Graphical user interface, Spike detection, Spike properties

4.

The Influence of Circadian Rhythms on CD8 T Cell Activation Upon Vaccination: A Mathematical Modeling Perspective

Number of pages: 45 Posted: 12 Dec 2023
Nasri Balit, Nicolas Cermakian and Anmar Khadra
McGill University, McGill University and McGill University - Department of Physiology
Downloads 31 (1,345,526)

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CD8+ T cells, Adaptive immunity, Vaccination dynamics, Circadian Rhythm, Mathematical modeling, Bifurcation analysis, Bistable switch, PRCC, Population level bistable switch

5.

Understanding How Differences in Morphology, Intrinsic Properties, and Extrinsic Synaptic Input Shape Spiking Activity in Sensory Neural Populations in vivo

Number of pages: 41 Posted: 03 Oct 2023
Amin Akhshi, Myriah Haggard, Mariana M. Marquez, Saeed Farjami, Maurice J. Chacron and Anmar Khadra
McGill University - Department of Physiology, McGill University - Department of Physiology, McGill University - Department of Physiology, University of Exeter, McGill University - Department of Physiology and McGill University - Department of Physiology
Downloads 24 (1,424,331)

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neural coding, neural heterogeneities, serotonin, computational model, electrosensory system

6.

Visual Attention to Features and Space in Mice Using Reverse Correlation

Number of pages: 19 Posted: 06 Jan 2023
Jonas Lehnert, Kuwook Cha, Jaime Halperin, Kerry Yang, Daniel F. Zheng, Anmar Khadra, Erik P. Cook and Arjun Krishnaswamy
McGill University - Department of Physiology, McGill University - Department of Physiology, McGill University - Department of Physiology, McGill University - Department of Physiology, McGill University - Department of Physiology, McGill University - Department of Physiology, McGill University - Department of Physiology and McGill University - Department of Physiology
Downloads 23 (1,436,435)

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Attention, Vision, head-fixed behavior, mice, reverse-correlation