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Peng Ye

Shanghai Artificial Intelligence Laboratory

SCHOLARLY PAPERS

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Scholarly Papers (2)

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1.

Genomics-FM: Universal Foundation Model for Versatile and Data-Efficient Functional Genomic Analysis

Number of pages: 23 Posted: 25 Nov 2024
Peng Ye, Weiqiang Bai, Yuchen Ren, Wenran Li, Lifeng Qiao, Chaoqi Liang, Linxiao Wang, Yuchen Cai, Jianle Sun, Zejun Yang, Peng Zheng, Tao Chen, Zhihui Wang, Xihui Liu, Nanqing Dong, Xinzhu Ma, Hongliang Yan, Zhen Wang, Sijia Wang, Wanli Ouyang and Sneak Peek Administrator
Shanghai Artificial Intelligence Laboratory, Shanghai Artificial Intelligence Laboratory, Shanghai Artificial Intelligence Laboratory, Chinese Academy of Sciences (CAS), Shanghai Artificial Intelligence Laboratory, Shanghai Artificial Intelligence Laboratory, Chinese Academy of Sciences (CAS), Shanghai Artificial Intelligence Laboratory, Carnegie Mellon University, Shanghai Artificial Intelligence Laboratory, Shanghai Artificial Intelligence Laboratory, Fudan University, Dalian University of Technology, The University of Hong Kong, Shanghai Artificial Intelligence Laboratory, Shanghai Artificial Intelligence Laboratory, Shanghai Artificial Intelligence Laboratory, Chinese Academy of Sciences (CAS), Chinese Academy of Sciences (CAS), Shanghai Artificial Intelligence Laboratory and Independent
Downloads 37 (1,222,651)

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foundation model, genomic vocabulary, label-efficient, cross domain

2.

scMOBA: A Conversational Single-Cell Multi-Omics Foundation Model for Brain Research

Number of pages: 71 Posted: 19 Mar 2026
Ran Wei, Ziyao Zhang, Jianle Sun, Yongkang Sun, Guoming Ma, Junkai Zhang, Juan Meng, Peng Zheng, Chaoqi Liang, Fanyi Meng, Wanli Ouyang, Lei Bai, Peng Ye and Yidi Sun
Shanghai Artificial Intelligence Laboratory, Chinese Academy of Sciences (CAS), Carnegie Mellon University, Chinese Academy of Sciences (CAS), Chinese Academy of Sciences (CAS), Chinese Academy of Sciences (CAS), Chinese Academy of Sciences (CAS), Shanghai Artificial Intelligence Laboratory, Shanghai Artificial Intelligence Laboratory, Shanghai Artificial Intelligence Laboratory, Shanghai Artificial Intelligence Laboratory, Shanghai Artificial Intelligence Laboratory, Shanghai Artificial Intelligence Laboratory and Chinese Academy of Sciences (CAS)
Downloads 15 (1,509,872)

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Single-cell multi-omics, Foundation model, conversational, Feature-Question-Answer, zero-shot, brain research