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De Novo Variants in Chinese Asd Trios Reveal Distinct Genetic Basis Underlying Autism with and Without Developmental Delay

42 Pages Posted: 20 Oct 2021 Publication Status: Review Complete

See all articles by Jincheng Wang

Jincheng Wang

Chinese Academy of Sciences (CAS) - CAS Center for Excellence in Brain Science and Intelligence Technology

Juehua Yu

Shanghai Jiao Tong University (SJTU) - MOE Shanghai Key Laboratory for Children's Environmental Health

Mengdi Wang

Chinese Academy of Sciences (CAS) - Institute of Biophysics

Lingli Zhang

Shanghai Jiao Tong University (SJTU) - MOEShanghai Key Laboratory for Children’s Environmental Health

Kan Yang

Chinese Academy of Sciences (CAS) - CAS Center for Excellence in Brain Science and Intelligence Technology

Xiujuan Du

Shanghai Jiao Tong University (SJTU) - MOEShanghai Key Laboratory for Children’s Environmental Health

Jinyu Wu

Wenzhou Medical University - Institute of Genomic Medicine

Xiaoqun Wang

Chinese Academy of Sciences (CAS) - State Key Laboratory of Brain and Cognitive Science

Fei Li

Shanghai Jiao Tong University (SJTU) - MOE and Shanghai Key Laboratory of Children’s Environmental Health

Zilong Qiu

Chinese Academy of Sciences (CAS) - CAS Key Laboratory of Primate Neurobiology; Shanghai Jiao Tong University (SJTU)

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Abstract

Autism spectrum disorder (ASD) is a complex neurodevelopmental disorder causing social communication and stereotypical behavioral impairments, often with developmental delay or intellectual disabilities (DD/ID). Here, we performed whole-exome sequencing on 772 Chinese ASD trios, combining with a previous 369 ASD trios, to identify de novo variants in 1141 ASD trios. We found that ASD without DD/ID carried less disruptive de novo variants than ASD with DD/ID. Surprisingly, we found that expression of genes with de novo variants in ASD without DD/ID were enriched in a subtype of human neural progenitor cells. Importantly, some ASD risk genes identified in this study are not present in the current ASD gene database, suggesting that there are ubique genetic contributors to ASD in East Asian populations. Together, this work nominates novel ASD risk genes and indicates that ASD genetic studies in different geographic populations are essential to reveal the comprehensive genetic architecture of ASD.

Suggested Citation

Wang, Jincheng and Yu, Juehua and Wang, Mengdi and Zhang, Lingli and Yang, Kan and Du, Xiujuan and Wu, Jinyu and Wang, Xiaoqun and Li, Fei and Qiu, Zilong, De Novo Variants in Chinese Asd Trios Reveal Distinct Genetic Basis Underlying Autism with and Without Developmental Delay. Available at SSRN: https://ssrn.com/abstract=3946571 or http://dx.doi.org/10.2139/ssrn.3946571
This version of the paper has not been formally peer reviewed.

Jincheng Wang

Chinese Academy of Sciences (CAS) - CAS Center for Excellence in Brain Science and Intelligence Technology ( email )

52 Sanlihe Rd.
Datun Road, Anwai
Beijing, Xicheng District 100864
China

Juehua Yu

Shanghai Jiao Tong University (SJTU) - MOE Shanghai Key Laboratory for Children's Environmental Health ( email )

KoGuan Law School
Shanghai 200030, Shanghai 200052
China

Mengdi Wang

Chinese Academy of Sciences (CAS) - Institute of Biophysics ( email )

52 Sanlihe Rd.
Datun Road, Anwai
Beijing, Xicheng District 100864
China

Lingli Zhang

Shanghai Jiao Tong University (SJTU) - MOEShanghai Key Laboratory for Children’s Environmental Health ( email )

KoGuan Law School
Shanghai 200030, Shanghai 200052
China

Kan Yang

Chinese Academy of Sciences (CAS) - CAS Center for Excellence in Brain Science and Intelligence Technology ( email )

Shanghai
China

Xiujuan Du

Shanghai Jiao Tong University (SJTU) - MOEShanghai Key Laboratory for Children’s Environmental Health ( email )

KoGuan Law School
Shanghai 200030, Shanghai 200052
China

Jinyu Wu

Wenzhou Medical University - Institute of Genomic Medicine ( email )

China

Xiaoqun Wang

Chinese Academy of Sciences (CAS) - State Key Laboratory of Brain and Cognitive Science ( email )

China

Fei Li

Shanghai Jiao Tong University (SJTU) - MOE and Shanghai Key Laboratory of Children’s Environmental Health ( email )

Zilong Qiu (Contact Author)

Chinese Academy of Sciences (CAS) - CAS Key Laboratory of Primate Neurobiology ( email )

Shanghai, 200031
China

Shanghai Jiao Tong University (SJTU) ( email )

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