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Deep Learning Assisted Segmentation and Detection for Intracranial Aneurysms Magnetic Resonance T1 Imaging: Development and Validation

24 Pages Posted: 27 Jul 2022

See all articles by Junda Qu

Junda Qu

Capital Medical University - Department of Biomedical Engineering

Hao Niu

Capital Medical University - Beijing Tiantan Hospital

Yutang Li

Capital Medical University - Department of Biomedical Engineering

Ting Chen

Capital Medical University - Department of Biomedical Engineering

Fei Peng

Capital Medical University - Beijing Tiantan Hospital

Jiaxiang Xia

Capital Medical University - Beijing Tiantan Hospital

Xiaoxin He

Capital Medical University - Beijing Tiantan Hospital

Boya Xu

Capital Medical University - Beijing Tiantan Hospital

Xuge Chen

Capital Medical University - Beijing Tiantan Hospital

Rui Li

Tsinghua University - Department of Biomedical Engineering

Chunlin Li

Capital Medical University - Department of Biomedical Engineering

Aihua Liu

Capital Medical University - Beijing Tiantan Hospital

Xu Zhang

Capital Medical University - Department of Biomedical Engineering

More...

Abstract

Background: There are almost no methods for IAs segmentation based on T1 images, which are the most commonly used in clinical. In this study we developed a deep learning framework for IAs segmentation and detection based on T1 images.

Methods: A retrospective, diagnostic study was carried out based on 194 IAs from the 136 patients who underwent the T1 images in Beijing Tiantan Hospital. 162 were randomly used for training and validation, and 32 were used to test the accuracy and concordance of our algorithm. We designed and assembled three convolutional neural networks to segment and detect the IAs.

Findings: Our assembled model achieved overall Dice, voxel-level sensitivity, specificity, balanced accuracy and F1 score of 0.77, 0.88, 0.999, 0.942 and 0.77, respectively. When the coincidence of the aneurysms predicted by the model with the ground truth is greater than 0.7, we consider it to be a true positive. For detection of IAs, the sensitivity reached 93.75% with 0.77 false positives per scans. At the same time, the volume segmented by our model has a high agreement and consistency with the volume labeled by experts.

Interpretation: The deep learning framework is feasible and robust for segmentation and detection of IAs. It is more in line with the actual clinical needs, and has more potential for clinical applications than DSA, CTA and MRA.

Funding Information: This work was supported by the National Natural Science Foundation of China (No. 62171300, 82171290), Natural Science Foundation of Beijing Municipality (No. 7222050, L192013), Beijing Municipal Administration of Hospital’s Ascent Plan (DFL20190501).

Declaration of Interests: All authors have no conflicts of interest to declare.

Ethics Approval Statement: This study was approved by the Institutional Ethical Committee of Beijing Tiantan Hospital Patients diagnosed with IAs between May 2015 to December 2021 were recruited.

Keywords: Intracranial Aneurysms, Detection and Segmentation, Magnetic Resonance Imaging, T1, Deep Learning

Suggested Citation

Qu, Junda and Niu, Hao and Li, Yutang and Chen, Ting and Peng, Fei and Xia, Jiaxiang and He, Xiaoxin and Xu, Boya and Chen, Xuge and Li, Rui and Li, Chunlin and Liu, Aihua and Zhang, Xu, Deep Learning Assisted Segmentation and Detection for Intracranial Aneurysms Magnetic Resonance T1 Imaging: Development and Validation. Available at SSRN: https://ssrn.com/abstract=4174298 or http://dx.doi.org/10.2139/ssrn.4174298

Junda Qu

Capital Medical University - Department of Biomedical Engineering ( email )

Hao Niu

Capital Medical University - Beijing Tiantan Hospital ( email )

Beijing, 100050
China

Yutang Li

Capital Medical University - Department of Biomedical Engineering ( email )

Ting Chen

Capital Medical University - Department of Biomedical Engineering ( email )

Fei Peng

Capital Medical University - Beijing Tiantan Hospital ( email )

Beijing, 100050
China

Jiaxiang Xia

Capital Medical University - Beijing Tiantan Hospital ( email )

Beijing, 100050
China

Xiaoxin He

Capital Medical University - Beijing Tiantan Hospital ( email )

Beijing, 100050
China

Boya Xu

Capital Medical University - Beijing Tiantan Hospital ( email )

Beijing, 100050
China

Xuge Chen

Capital Medical University - Beijing Tiantan Hospital ( email )

Beijing, 100050
China

Rui Li

Tsinghua University - Department of Biomedical Engineering ( email )

Chunlin Li (Contact Author)

Capital Medical University - Department of Biomedical Engineering ( email )

Aihua Liu

Capital Medical University - Beijing Tiantan Hospital ( email )

Beijing, 100050
China

Xu Zhang

Capital Medical University - Department of Biomedical Engineering ( email )

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