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A Host AAA-ATPase Exhibits Bacteriolytic Activity for Clearance of Microbial Infection

47 Pages Posted: 11 Jul 2023 Publication Status: Review Complete

See all articles by Sourav Ghosh

Sourav Ghosh

Indian Institute of Technology (IIT), Bombay - Department of Biosciences and Bioengineering

Suvapriya Roy

Indian Institute of Technology (IIT), Bombay - Department of Biosciences and Bioengineering

Navin Baid

Indian Institute of Technology (IIT), Bombay - Department of Biosciences and Bioengineering

Udit Kumar Das

Indian Institute of Technology (IIT), Bombay - Department of Biosciences and Bioengineering

Dipasree Hajra

Indian Institute of Science (IISc) - Department of Microbiology and Cell Biology

Sneha Menon

Tata Institute of Fundamental Research- Hyderabad (TIFR-H)

Mohammad Sahil

Tata Institute of Fundamental Research- Hyderabad (TIFR-H)

Sudipti Shaw

Indian Institute of Technology (IIT), Bombay - Department of Biosciences and Bioengineering

Sumit Rakshit

Indian Institute of Technology (IIT), Bombay - Department of Biosciences and Bioengineering

Raju S. Rajmani

Indian Institute of Science (IISc) - Department of Microbiology and Cell Biology

Harikrishna Adicherla

CSIR-Centre for Cellular and Molecular Biology

Jagannath Mondal

Tata Institute of Fundamental Research- Hyderabad (TIFR-H)

Dipshikha Chakravortty

Indian Institute of Science (IISc) - Department of Microbiology and Cell Biology

Anirban Banerjee

Indian Institute of Technology (IIT), Bombay - Department of Biosciences and Bioengineering

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Abstract

An array of cytosol guarding factors impede bacterial invasion and preserve cellular sterility. Amongst them, proteasomal degradation of ubiquitinated pathogens has emerged as a critical mechanism ensuring cytosolic sanctity. But smaller size of the proteasomal barrel and its inability to extract membrane-bound proteins, questions this paradigm. Our study unveiled a unique mechanical force-based strategy, employed by VCP/p97, an AAA-ATPase, which by extracting ubiquitinated bacterial surface proteins, eliminates pathogens. Using molecular dynamic simulation along with in-vitro and ex-vivo experiments, we demonstrated that p97’s segregase activity is central to its bactericidal effect. Assisted by cofactors NPLOC4 and UFD1, p97 causes extensive lysis of phylogenetically diverse microbes and triggers leaching of bacterial cytosolic contents. In-vivo, p97 abrogated bacterial proliferation in host tissues and protected animals from lethal infections. Overall, we unravelled a distinct innate immune function of p97, which is critical for host protection against bacterial infections.

Keywords: VCP/p97, AAA-ATPase, Bacterial pathogens, Ubiquitination, Cell autonomous immunity, Proteasome

Suggested Citation

Ghosh, Sourav and Roy, Suvapriya and Baid, Navin and Das, Udit Kumar and Hajra, Dipasree and Menon, Sneha and Sahil, Mohammad and Shaw, Sudipti and Rakshit, Sumit and Rajmani, Raju S. and Adicherla, Harikrishna and Mondal, Jagannath and Chakravortty, Dipshikha and Banerjee, Anirban, A Host AAA-ATPase Exhibits Bacteriolytic Activity for Clearance of Microbial Infection. Available at SSRN: https://ssrn.com/abstract=4503771 or http://dx.doi.org/10.2139/ssrn.4503771
This version of the paper has not been formally peer reviewed.

Sourav Ghosh

Indian Institute of Technology (IIT), Bombay - Department of Biosciences and Bioengineering ( email )

Suvapriya Roy

Indian Institute of Technology (IIT), Bombay - Department of Biosciences and Bioengineering ( email )

Navin Baid

Indian Institute of Technology (IIT), Bombay - Department of Biosciences and Bioengineering ( email )

Udit Kumar Das

Indian Institute of Technology (IIT), Bombay - Department of Biosciences and Bioengineering ( email )

Dipasree Hajra

Indian Institute of Science (IISc) - Department of Microbiology and Cell Biology ( email )

Sneha Menon

Tata Institute of Fundamental Research- Hyderabad (TIFR-H) ( email )

Mohammad Sahil

Tata Institute of Fundamental Research- Hyderabad (TIFR-H) ( email )

Sudipti Shaw

Indian Institute of Technology (IIT), Bombay - Department of Biosciences and Bioengineering ( email )

Sumit Rakshit

Indian Institute of Technology (IIT), Bombay - Department of Biosciences and Bioengineering ( email )

Raju S. Rajmani

Indian Institute of Science (IISc) - Department of Microbiology and Cell Biology ( email )

Harikrishna Adicherla

CSIR-Centre for Cellular and Molecular Biology ( email )

Jagannath Mondal

Tata Institute of Fundamental Research- Hyderabad (TIFR-H) ( email )

Dipshikha Chakravortty

Indian Institute of Science (IISc) - Department of Microbiology and Cell Biology ( email )

Anirban Banerjee (Contact Author)

Indian Institute of Technology (IIT), Bombay - Department of Biosciences and Bioengineering ( email )

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