lancet-header

Preprints with The Lancet is a collaboration between The Lancet Group of journals and SSRN to facilitate the open sharing of preprints for early engagement, community comment, and collaboration. Preprints available here are not Lancet publications or necessarily under review with a Lancet journal. These preprints are early-stage research papers that have not been peer-reviewed. The usual SSRN checks and a Lancet-specific check for appropriateness and transparency have been applied. The findings should not be used for clinical or public health decision-making or presented without highlighting these facts. For more information, please see the FAQs.

Polygenic Risk Score-Based Phenome-Wide Association for Glaucoma and its Impact on Disease Susceptibility in Two Large Biobanks

30 Pages Posted: 12 Jan 2024

See all articles by Jae-Seung Yun

Jae-Seung Yun

The Catholic University of Korea - Division of Endocrinology and Metabolism

Sang-Hyuk Jung

University of Pennsylvania - Perelman School of Medicine

Su-Nam Lee

Catholic University of Korea

Seung Min Jung

Catholic University of Korea

Penn Medicine Biobank Penn Medicine Biobank

University of Pennsylvania

Hong-Hee Won

Sungkyunkwan University - Samsung Advanced Institute of Health Sciences and Technology (SAIHST)

Dokyoon Kim

University of Pennsylvania - Department of Biostatistics, Epidemiology, and Informatics

Jin A. Choi

Catholic University of Korea

More...

Abstract

Background: Glaucoma is a leading cause of worldwide irreversible blindness. Considerable uncertainty remains regarding the association between a variety of phenotypes and the genetic risk of glaucoma, as well as the impact they exert on the glaucoma development.

Methods: We investigated the associations of genetic liability for POAG with a wide range of potential risk factors for and to assess its impact on the risk of incident glaucoma.

Participants: The phenome-wide association study (PheWAS) approach was applied to determine the association of POAG polygenic risk score (PRS) with a wide range of phenotypes in 377,909 participants from the UK Biobank study and 43,623 participants from the Penn Medicine Biobank study. Participants were stratified into four risk tiers: low, intermediate, high, and very high-risk. Cox proportional hazard models assessed the relationship of POAG PRS and ocular factors with new glaucoma events.

Findings: In both discovery and replication set in the PheWAS, a higher genetic predisposition to POAG was specifically correlated with ocular disease phenotypes. The genetic risk score exhibited correlations with low corneal hysteresis, refractive error, and ocular hypertension, demonstrating a strong association with the onset of glaucoma. Individuals carrying a high genetic burden exhibited a 9.2-fold, 11.88-fold, and 28.85-fold increase in glaucoma incidence when associated with low corneal hysteresis, high myopia, and elevated intraocular pressure (IOP), respectively.

Interpretation: Genetic susceptibility to POAG primarily influences ocular conditions, with limited systemic associations. Notably, the baseline polygenic risk for POAG robustly associates with new glaucoma events, revealing a large combined effect of genetic and ocular risk factors on glaucoma incidents.

Funding: The National Research Foundation of Korea Grant funded by the Korean government (MSIP) (No. NRF- 2022R1A2C1012677).

Declaration of Interest: The authors declare no conflicts of interest.

Ethical Approval: This UK Biobank study was ethically approved by the Northwest Multi-center Research Ethics Committee (June 17, 2011 [reference 11/NW/0382]; this was extended on May 13, 2016 [reference 16/NW/0274] and on June 29, 2021 [reference 21/NW/0157]). The present research was conducted using the UK Biobank Resource under application number 90981. All research adhered to the tenets of the Declaration of Helsinki.

Keywords: Primary Open-Angle Glaucoma, Polygenic Risk Score, Phenome-Wide Associations

Suggested Citation

Yun, Jae-Seung and Jung, Sang-Hyuk and Lee, Su-Nam and Jung, Seung Min and Penn Medicine Biobank, Penn Medicine Biobank and Won, Hong-Hee and Kim, Dokyoon and Choi, Jin A., Polygenic Risk Score-Based Phenome-Wide Association for Glaucoma and its Impact on Disease Susceptibility in Two Large Biobanks. Available at SSRN: https://ssrn.com/abstract=4689893 or http://dx.doi.org/10.2139/ssrn.4689893

Jae-Seung Yun

The Catholic University of Korea - Division of Endocrinology and Metabolism ( email )

Sang-Hyuk Jung

University of Pennsylvania - Perelman School of Medicine ( email )

Su-Nam Lee

Catholic University of Korea ( email )

Seung Min Jung

Catholic University of Korea ( email )

Penn Medicine Biobank Penn Medicine Biobank

University of Pennsylvania ( email )

Philadelphia, PA 19104
United States

Hong-Hee Won

Sungkyunkwan University - Samsung Advanced Institute of Health Sciences and Technology (SAIHST) ( email )

Seoul, 440-660
Korea, Republic of (South Korea)

Dokyoon Kim

University of Pennsylvania - Department of Biostatistics, Epidemiology, and Informatics ( email )

Jin A. Choi (Contact Author)

Catholic University of Korea ( email )