Multiplex Aggregation Combining Sample Reweight Composite Network for Pathology Image Segmentation

17 Pages Posted: 31 Oct 2024

See all articles by Dawei Fan

Dawei Fan

affiliation not provided to SSRN

Zhuo Chen

affiliation not provided to SSRN

Yifan Gao

affiliation not provided to SSRN

Jiaming Yu

affiliation not provided to SSRN

Kaibin Li

affiliation not provided to SSRN

Yi Wei

Wuyi University

Yanping Chen

Fujian Medical University - Fujian Cancer Hospital

Riqing Chen

Fujian Agriculture and Forestry University

Lifang Wei

Fujian Agriculture and Forestry University

Multiple version iconThere are 2 versions of this paper

Abstract

In digital pathology, nuclei segmentation is a critical task for pathological image analysis, holding significant importance for diagnosis and research. However, challenges such as blurred boundaries between nuclei and background regions, domain shift between pathological images, and uneven distribution of nuclei pose significant obstacles to segmentation tasks. To address these issues, we propose an innovative Causal inference inspired Diversified aggregation convolution Network named CDNet, which integrates a Diversified Aggregation Convolution (DAC), a Causal Inference Module (CIM) based on causal discovery principles, and a comprehensive loss function. DAC improves the issue of unclear boundaries between nuclei and background regions, and CIM enhances the model's cross-domain generalization ability. A novel Stable-Weighted Combined loss function was designed that combined the chunk-computed Dice Loss with the Focal Loss and the Causal Inference Loss to address the issue of uneven nuclei distribution. Experimental evaluations on the MoNuSeg, GLySAC, and MoNuSAC datasets demonstrate that CDNet significantly outperforms other models and exhibits strong generalization capabilities. Specifically, CDNet outperforms the second-best model by 3.90% (mIoU) and 2.80% (DSC) on the MoNuSeg dataset, by 2.65% (mIoU) and 2.13% (DSC) on the GLySAC dataset, and by 1.54% (mIoU) and 1.10% (DSC) on the MoNuSAC dataset.

Keywords: Digital Pathology, Nuclei segmentation, Feature Fusion, Causal Inference, Spurious Correlation.

Suggested Citation

Fan, Dawei and Chen, Zhuo and Gao, Yifan and Yu, Jiaming and Li, Kaibin and Wei, Yi and Chen, Yanping and Chen, Riqing and Wei, Lifang, Multiplex Aggregation Combining Sample Reweight Composite Network for Pathology Image Segmentation. Available at SSRN: https://ssrn.com/abstract=4991168 or http://dx.doi.org/10.2139/ssrn.4991168

Dawei Fan

affiliation not provided to SSRN ( email )

No Address Available

Zhuo Chen

affiliation not provided to SSRN ( email )

No Address Available

Yifan Gao

affiliation not provided to SSRN ( email )

No Address Available

Jiaming Yu

affiliation not provided to SSRN ( email )

No Address Available

Kaibin Li

affiliation not provided to SSRN ( email )

No Address Available

Yi Wei

Wuyi University ( email )

Jiangmen
China

Yanping Chen

Fujian Medical University - Fujian Cancer Hospital ( email )

Fujian
China

Riqing Chen

Fujian Agriculture and Forestry University ( email )

Fujian Road
Fuzhou, 350002
China

Lifang Wei (Contact Author)

Fujian Agriculture and Forestry University ( email )

Fujian Road
Fuzhou, 350002
China

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