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Krupa Thakkar

University College London - UCL Cancer Institute

SCHOLARLY PAPERS

4

DOWNLOADS

390

TOTAL CITATIONS

1

Scholarly Papers (4)

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1.

Pharmacologic Inhibition of Nonsense-Mediated Decay Induces Anti-Tumour Immunogenicity in Ex Vivo Patient Tumours

Number of pages: 65 Posted: 16 Feb 2024
Roberto Vendramin, Hongchang Fu, Yue Zhao, Shanila Fernandez Patel, Danwen Qian, Lorena Ligammari, Ronen Levy, Polina Greenberg, Andrea Castro, Krupa Thakkar, Lisa Nguyen, Gordon Beattie, Jun Murai, Despoina Karagianni, Mansi Shah, Petra Vlckova, Manuel Rodriguez-Justo, Christopher C.T. Sng, Benjamin S. Simpson, Krijn K. Djikstra, Osnat Bartok, Felipe Galvez-Cancino, The TRACERx Consortium, Eva Gronroos, Stephen Dann, Sergio A. Quezada, James Reading, Yardena Samuels, Charles Swanton, Kevin Litchfield and Sneak Peek Administrator
University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, Weizmann Institute of Science, Weizmann Institute of Science, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, Genesis Therapeutics, Inc., University College London - Cancer Immunology Unit, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - Research Department of Hematology, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, The Francis Crick Institute, The Hebrew University of Jerusalem, University College London - UCL Cancer Institute, Independent, The Francis Crick Institute, Genesis Therapeutics, Inc., University College London - Cancer Immunology Unit, University College London - UCL Cancer Institute, Weizmann Institute of Science, The Francis Crick Institute - Cancer Evolution and Genome Instability Laboratory, University College London - UCL Cancer Institute and Independent
Downloads 206 (369,861)
Citation 1

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Nonsense-mediated decay, SMG1, cancer, anti-tumour immunogenicity, neoantigens, frameshift insertions/deletions, patient-derived fragments.

2.

Cancer Associated Bacteria in Primary and Metastatic Non-Small Cell Lung Cancer

Number of pages: 23 Posted: 09 May 2024
Krupa Thakkar, Corentin Richard, Hongchang Fu, Benjamin S. Simpson, Hongui Cha, Marcellus Augustine, Alexander Coulton, Andrea Castro, Selvaraju Veerian, Khalid AbdulJabbar, Hanyun Zhang, Alexandros Hardas, Othman Al-Sawaf, Arianna Huebner, Maise Al-Bakir, Takahiro Karasaki, Oriol Pich, Chris Bailey, Yongwoo David Seo, Ashish Damania, Manoj Chelvanambi, Nadim J. Ajami, David Moore, Monika Sivakumar, Mark Hill, Alexander Frankell, Sophie Ward, Cristina Naceur-Lombardelli, Roberto Salgado, Ayse Akarca, Teresa Marafioti, Nicholas McGranahan, Mariam Jamal-Hanjani, Jennifer Wargo, Joanne Santini, Charles Swanton, Kevin Litchfield and Sneak Peek Administrator
University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, Institute of Cancer Research (ICR) - Centre for Evolution and Cancer, Institute of Cancer Research (ICR) - Centre for Evolution and Cancer, University of London - Royal Veterinary College, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, University of Texas at Houston - MD Anderson Cancer Center, affiliation not provided to SSRN, affiliation not provided to SSRN, University of Texas at Houston - Department of Genomic Medicine, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, University College London - UCL Cancer Institute, Peter MacCallum Cancer Centre - Division of Research, University College London Hospital - Department of Cellular Pathology, University College London Hospital - Department of Cellular Pathology, University College London - Cancer Genome Evolution Research Group, University College London - UCL Cancer Institute, University of Texas at Houston - Department of Genomic Medicine, University College London, The Francis Crick Institute - Cancer Evolution and Genome Instability Laboratory, University College London - UCL Cancer Institute and Independent
Downloads 103 (684,672)

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Lung cancer, microbiome, tumour evolution, intratumoural bacteria

3.

A Pan-Cancer Single-Cell RNA-Seq Atlas of Intratumoral B Cells

Number of pages: 29 Posted: 19 Dec 2023
Evelyn Fitzsimons, Krupa Thakkar, Marcellus Augustine, Andrei Enica, Danwen Qian, James Reading and Kevin Litchfield
University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute, University College London - UCL Cancer Institute and University College London - UCL Cancer Institute
Downloads 55 (1,010,164)

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Single-cell RNA sequencing, Tumour-infiltrating B cells, B cell subsets, Checkpoint Inhibitor Response, Publicly available tool

4.

Intratumoural Bacteria Promote Myeloid Inflammation and Disease Progression in Clear Cell Renal Cell Carcinoma: TRACERx Renal

Number of pages: 56 Posted: 02 May 2026
Alice Claire Martin, Anne-Laure Cattin, Parise Lockwood, Martha A. Zepeda-Rivera, Clara Becker, Taja Barber, Irene Lobon, Krupa Thakkar, Leo J. Bickley, Zayd Tippu, Laura Marandino, Marija Miletic, Lucy Meader, Mary Green, Donald Bell, Brian Hanley, Barbara Ibrazo Yus, Fiona Byrne, Charlotte Spencer, Scott Shepherd, Annika Fendler, Lewis Au, Daqi Deng, Angel Fernandez Sanroman, Sarah Rudman, James M. G. Larkin, Kevin Litchfield, Maximiliano G. Gutierrez, Samra Turajlic and Sneak Peek Administrator
The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, University of Texas at Houston - MD Anderson Cancer Center, Fred Hutchinson Cancer Research Center, The Francis Crick Institute, The Francis Crick Institute, University College London - UCL Cancer Institute, The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, Francis Crick Institute - Cancer Dynamics Laboratory, The Francis Crick Institute, Francis Crick Institute - Cancer Dynamics Laboratory, The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, The Francis Crick Institute, Guy's and St Thomas' NHS Foundation Trust, NHS Foundation Trust - Royal Marsden Hospital, University College London - UCL Cancer Institute, The Francis Crick Institute, The Francis Crick Institute - Cancer Evolution and Genome Instability Laboratory and Independent
Downloads 26 (1,436,435)

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Renal Cancer, ccRCC, Tumour Microbiome, Myeloid Inflammation