Epicentre (Paris), Epicentre (Mbarara), Epicentre (Mbarara), Médecins sans Frontières, Homabay, Kenya, Médecins sans Frontières, Maputo, Mozambique, Médecins sans Frontières, Eshowe, South Africa, Mbarara Regional Referral Hospital, Epicentre (Mbarara), Médecins sans Frontières, Eshowe, South Africa, Epicentre (Paris), Médecins sans Frontières, Eshowe, South Africa, Médecins Sans Frontières - Southern Africa Medical Unit, Médecins sans Frontières (Paris), Uganda Tuberculosis Implementation Research Consortium, Government of Kenya - Kenya Ministry of Health, Government of Kenya, Kenya Ministry of Health, National Tuberculosis, Leprosy and Lung Disease Programme, Department of Health, KwaZulu-Natal Province, Department of Health, King Cetswayo District, Republic of Mozambique - Ministry of Health, Médecins sans Frontières, Nairobi, Kenya, Médecins sans Frontières, Nairobi, Kenya, Epicentre (Mbarara), Epicentre (Paris), University of Tübingen - Mycobacteriology Unit, Elizabeth Glaser Pediatric AIDS Foundation (Switzerland) - Department of Innovation and New Technology, Médecins Sans Frontières - Southern Africa Medical Unit, Makerere University, University College London - Institute for Global Health and University of Montpellier - Translational Research in HIV and Infectious Diseases (TransVIHMI)

MU-JHU Care Ltd - MUJHU Research Collaboration, MU-JHU Care Ltd - MUJHU Research Collaboration, University of Bordeaux - National Institute for Health and Medical Research (INSERM) UMR 1219, Chantal Biya Foundation - Mother and Child Center, Universite Félix Houphouet Boigny - University of Felix Houphouet Boigny - Teaching Unit of Dermatology and Infectiology, Solthis (France), Instituto Nacional de Saúde., Institute Pasteur du Cambodge - Epidemiology and Public Health Unit, Epicentre (Mbarara), Ola During Children’s Hospital, University of Montpellier - Translational Research in HIV and Infectious Diseases (TransVIHMI), University Hospital of Treichville - PACCI ANRS Research Programme, SOLTHIS, Epicentre (Mbarara), Institute Pasteur du Cambodge - Epidemiology and Public Health Unit, Institute Pasteur du Cambodge - Epidemiology and Public Health Unit, Instituto Nacional de Saúde., University of Bordeaux - National Institute for Health and Medical Research (INSERM) UMR 1219, University of Bordeaux - National Institute for Health and Medical Research (INSERM) UMR 1219, University of Montpellier - MIVEGEC, Centre Pasteur du Cameroun (CPC), University of Bordeaux - National Institute for Health and Medical Research (INSERM) UMR 1219, Soutien Pneumologique International, Soutien Pneumologique International, Uganda Tuberculosis Implementation Research Consortium, Ministry of Health and Sanitation (Sierra Leone), Côte d’Ivoire NTP, Cameroon National Tuberculosis Program, affiliation not provided to SSRNMozambique National Tuberculosis Programme (NTP), Sierra Leone National Tuberculosis Program, UNICEF USA, World Health Organization (WHO) - World Health Organization, Geneva, Royal Government of Cambodia - National Center for Tuberculosis and Leprosy Control (CENAT), University of Bordeaux - National Institute for Health and Medical Research (INSERM) UMR 1219, University of Montpellier - Translational Research in HIV and Infectious Diseases (TransVIHMI), University of Bordeaux - National Institute for Health and Medical Research (INSERM) UMR 1219 and Independent

Uganda Tuberculosis Implementation Research Consortium, University of California, San Francisco (UCSF) - Division of Pulmonary and Critical Care Medicine, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Makerere University - College of Health Sciences, Johns Hopkins University, London School of Hygiene & Tropical Medicine, Department of Epidemiology of Microbial Diseases, Yale School of Public Health and Pulmonary, Critical Care, and Sleep Medicine, Yale School of Medicine, University of California, San Francisco (UCSF) - UCSF Center for Tuberculosis, University of California, San Francisco (UCSF) - Division of Pulmonary and Critical Care Medicine, University of California, San Francisco (UCSF) - Division of Pulmonary and Critical Care Medicine, London School of Hygiene & Tropical Medicine - Faculty of Infectious and Tropical Diseases and University of California, San Francisco (UCSF) - UCSF Center for Tuberculosis

University of California, San Francisco (UCSF) - UCSF Center for Tuberculosis, University of California, San Francisco (UCSF) - UCSF Center for Tuberculosis, Uganda Tuberculosis Implementation Research Consortium, Makerere University - Department of Epidemiology and Biostatistics, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Infectious Diseases Research Collaboration (Uganda), Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, University of California, San Francisco (UCSF) - Division of Pulmonary and Critical Care Medicine, Johns Hopkins University - Department of Epidemiology, University of California, San Francisco (UCSF) - The Better Lab, University of California, San Francisco (UCSF) - The Better Lab, Uganda Tuberculosis Implementation Research Consortium, Johns Hopkins University - Department of Epidemiology and Uganda Tuberculosis Implementation Research Consortium

University of California, San Francisco (UCSF) - UCSF Center for Tuberculosis, University of California, San Francisco (UCSF) - Division of Pulmonary and Critical Care Medicine, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Uganda Tuberculosis Implementation Research Consortium, Makerere University - Department of Epidemiology and Biostatistics, University of California, San Francisco (UCSF) - UCSF Center for Tuberculosis and Uganda Tuberculosis Implementation Research Consortium