Imperial College London, Imperial College London - Section of Paediatric Infectious Disease, Imperial College London, Imperial College London, Imperial College London, Imperial College London, University College London, Imperial College London, Imperial College London - Imperial College Healthcare NHS Trust, Department of Infectious Disease, Imperial College London, Imperial College London - Institute of Reproductive and Developmental Biology, Imperial College London, Imperial College London, Imperial College London, Department of Infectious Disease, Imperial College London, Imperial College London - Section of Paediatric Infectious Disease, Imperial College London, Imperial College London, University College London - Institute for Health Informatics, University of Oxford - Wellcome Centre for Human Genetics, Department of Infectious Disease, Imperial College London, Imperial College London - Department of Infectious Disease, University College London - Division of Infection and Immunity and Imperial College London - Department of Medicine

Uganda National Health Research Organisation (UNHRO), Entebbe, Ug, Karolinska Institutet, Imperial College London, Imperial College London, affiliation not provided to SSRN, Makerere University, Republic of Uganda Ministry of Health, affiliation not provided to SSRN, affiliation not provided to SSRN, Imperial College London, Imperial College London, affiliation not provided to SSRN, Ministry of Health, Oman, Makerere University, affiliation not provided to SSRN, Makerere University, Malaria Consortium, Makerere University, Imperial College London - Section of Adult Infectious Disease, University of Surrey, Government of the United Kingdom - Defence Science and Technology Laboratory, Makerere University, Imperial College London, University of St. Andrews - Division of Infection and Global Health and Please see PDF for full list of authors & affiliations