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Genji Kurisu

The University of Osaka

1-1 Yamadaoka

Suita

Osaka, 565-0871

Japan

  • The University of Osaka

SCHOLARLY PAPERS

6

DOWNLOADS

233

TOTAL CITATIONS

2

Scholarly Papers (6)

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1.

IHMValidation: Assessment of Integrative Structure Models Deposited to the Protein Data Bank

Number of pages: 25 Posted: 15 Oct 2025
Arthur Zalevsky, Brinda Vallat, Benjamin M. Webb, Hongsuda Tangmunarunkit, Monica Sekharan, Aref Shafaeibejestan, Sai Ganesan, Jared Sagendorf, Cy M. Jeffries, Jill Trewhella, Andrea Graziadei, Juan Antonio Vizcaíno, Alexander Leitner, Juri Rappsilber, Ezra Peisach, Justin W. Flatt, Jasmine Y. Young, Kartik Majila, Shruthi Viswanath, Carl Kesselman, Jeffrey C. Hoch, Genji Kurisu, Kyle Morris, Sameer Velnankar, Helen M. Berman, Stephen K. Burley and Andrej Sali
affiliation not provided to SSRN, Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank, affiliation not provided to SSRN, University of Southern California, Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank, University of Southern California, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, Technische Universität Berlin (TU Berlin) - Chair of Bioanalytics, Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank, Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank, Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank, Tata Institute of Fundamental Research (TIFR), Tata Institute of Fundamental Research (TIFR), University of Southern California, University of Connecticut - Department of Molecular Biology and Biophysics, The University of Osaka, European Bioinformatics Institute, European Bioinformatics Institute, Rutgers, The State University of New Jersey - Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank and UC, San Francisco - Dept. of Biopharmaceutical Sciences and Pharmaceutical Chemistry
Downloads 57 (989,921)

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Integrative modeling, Protein Data Bank (PDB), Small-angle X-ray scattering (SAXS), Crosslinking mass spectrometry (crosslinking-MS), Three-dimensional cryo-electron microscopy (3DEM)

2.

NMRhub: An NMR Data Ecosystem Spanning the Complete Data Lifecycle

Number of pages: 12 Posted: 01 Nov 2025
Mark W. Maciejewski, Kumaran Baskaran, Hongyang Yao, Hamid Eghbalnia, Genji Kurisu, Masashi Yokochi, Adam D. Schuyler, Christopher Bontempi, Jonathan R. Wedell, Gerard Weatherby, Harrison Burr, Yulia Pustovalova, Alexandra Pozhidaeva, Seenat Thongdee, Michael R. Gryk, Joseph M. Courtney, Qi Cheng, Michael P. Wilson, Ion I. Moraru, Bernd Simon, R. Andrew Byrd, Laura Morris, John N. Glushka, John H. Grimes, Mario Uchimiya, Alexander Eletsky, Abigail E. Moore, Alexander L. Paterson, Songlin Wang, Paulo R. Pinheiro, Boden Vanderloop, Miron Livny, Katherine Henzler-Wildman, Arthur S. Edison, Chad Rienstra and Jeffrey C. Hoch
affiliation not provided to SSRN, University of Connecticut - Biological Magnetic Resonance Data Bank, affiliation not provided to SSRN, affiliation not provided to SSRN, The University of Osaka, The University of Osaka, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, affiliation not provided to SSRN, European Molecular Biology Laboratory (EMBL) - Germany, affiliation not provided to SSRN, The University of Georgia, The University of Georgia, The University of Georgia, The University of Georgia, The University of Georgia, The University of Georgia, University of Wisconsin-Madison, University of Wisconsin-Madison, University of Wisconsin-Madison, University of Wisconsin-Madison, University of Wisconsin-Madison, University of Wisconsin-Madison, The University of Georgia, University of Wisconsin-Madison and University of Connecticut - Department of Molecular Biology and Biophysics
Downloads 51 (1,052,702)

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Nuclear magnetic resonance, structural biology, metabolomics, biomolecular dynamics

3.

Soluble Domains of Cytochrome C-556 and Rieske Iron-Sulfur Protein from Chlorobaculum Tepidum: Crystal Structures and Interaction Analysis

Number of pages: 44 Posted: 17 Jan 2023
Hirozo Oh-oka, Hiraku Kishimoto, Chihiro Azai, Tomoya Yamamoto, Risa Mutoh, Tetsuko Nakaniwa, Hideaki Tanaka, Yohei Miyanoiri and Genji Kurisu
The University of Osaka, The University of Osaka, affiliation not provided to SSRN, The University of Osaka, The University of Osaka, The University of Osaka, The University of Osaka, The University of Osaka and The University of Osaka
Downloads 48 (1,086,013)

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electron transfer, green sulfur bacteria, menaquinol:cytochrome c oxidoreductase, reaction center, Rieske/cytb complex

4.

Pdb-Ihm: A System for Deposition, Curation, Validation, and Dissemination of Integrative Structures

Number of pages: 15 Posted: 26 Nov 2024
Brinda Vallat, Benjamin M. Webb, Arthur Zalevsky, Hongsuda Tangmunarunkit, Monica Sekharan, Serban Voinea, Aref Shafaeibejestan, Jared Sagendorf, Jeffrey C. Hoch, Genji Kurisu, Kyle Morris, Sameer Velnankar, Carl Kesselman, Stephen K. Burley, Helen M. Berman and Andrej Sali
Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank, affiliation not provided to SSRN, affiliation not provided to SSRN, University of Southern California, Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank, University of Southern California, University of Southern California, affiliation not provided to SSRN, University of Connecticut - Department of Molecular Biology and Biophysics, The University of Osaka, European Bioinformatics Institute, European Bioinformatics Institute, University of Southern California, affiliation not provided to SSRN, Rutgers, The State University of New Jersey - Department of Chemistry and Chemical Biology and UC, San Francisco - Dept. of Biopharmaceutical Sciences and Pharmaceutical Chemistry
Downloads 39 (1,196,171)
Citation 1

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PDB, PDBx/mmCIF, integrative modeling, IHMCIF, structure validation, PDB-Dev, PDB-IHM

5.

Restraint Validation of Biomolecular Structures Determined By NMR in the Protein Data Bank

Number of pages: 35 Posted: 14 Jul 2023
Kumaran Baskaran, Eliza Ploskon, Roberto Tejero, Masashi Yokochi, Deborah Harrus, Yuhe Liang, Ezra Peisach, Irina Persikova, Theresa A. Ramelot, Monica Sekharan, James Tolchard, John D. Westbrook, Benjamin Bardiaux, Charles Schwieters, Ardan Patwardnhan, Sameer Velnankar, Stephen K. Burley, Genji Kurisu, Jeffrey C. Hoch, Gaetano Montelione, Geerten W. Vuister and Jasmine Y. Young
University of Connecticut - Biological Magnetic Resonance Data Bank, University of Leicester, Rensselaer Polytechnic Institute (RPI) - Department of Chemistry and Chemical Biology, The University of Osaka, European Bioinformatics Institute, Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank, Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank, Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank, Rensselaer Polytechnic Institute (RPI) - Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank, European Bioinformatics Institute, Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank, Institut Pasteur, Foundation for the National Institutes of Health - National Institute of Diabetes and Digestive and Kidney Diseases, European Bioinformatics Institute, European Bioinformatics Institute, Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank, The University of Osaka, University of Connecticut - Department of Molecular Biology and Biophysics, Rutgers University, Piscataway - Department of Biochemistry and Molecular Biology, University of Leicester and Rutgers, The State University of New Jersey - Research Collaboratory for Structural Bioinformatics Protein Data Bank
Downloads 20 (1,448,301)
Citation 1

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Nuclear Magnetic Resonance, Structure validation, NMR restraint validation, wwPDB, validation, NOE restraints, Dihedral-angle restraints, Chemical shift validation, NMR structure determination, wwPDB validation report, Distance restraints

6.

Diatom Pyrenoids are Encased in a Protein Shell that Enables Efficient Co2 Fixation

Number of pages: 56 Posted: 24 Oct 2023
Ginga Shimakawa, Manon Demulder, Serena Flori, Akihiro Kawamoto, Yoshinori Tsuji, Hermanus Nawaly, Atsuko Tanaka, Rei Tohda, Tadayoshi Ota, Hiroaki Matsui, Natsumi Morishima, Ryosuke Okubo, Wojciech Wietrzynski, Lorenz Lamm, Ricardo D. Righetto, Clarisse Uwizeye, Benoit Gallet, Pierre-Henri Jouneau, Christoph Gerle, Genji Kurisu, Giovanni Finazzi, Benjamin D. Engel, Yusuke Matsuda and Sneak Peek Administrator
Kwansei Gakuin University, University of Basel, University Grenoble Alpes, The University of Osaka, Kwansei Gakuin University, Kwansei Gakuin University, University of the Ryukyus, The University of Osaka, Kwansei Gakuin University, affiliation not provided to SSRN, Kwansei Gakuin University, Kwansei Gakuin University, University of Basel, Helmholtz Association of German Research Centres - Helmholtz Zentrum München, University of Basel, University Grenoble Alpes, University Grenoble Alpes, University Grenoble Alpes, The University of Osaka, The University of Osaka, University Grenoble Alpes, Max Planck Society for the Advancement of the Sciences - Department of Molecular Structural Biology, Kwansei Gakuin University and Independent
Downloads 18 (1,470,786)

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diatoms, phytoplankton, chloroplast, pyrenoids, photosynthesis, CO2 assimilation, CO2-concentrating mechanism, mass spectrometry, in vitro reconstitution, cryo-EM, focused ion beam, cryo-ET