Heidelberg University Hospital - Division of Infectious Disease and Tropical Medicine, Heidelberg University Hospital - Division of Infectious Disease and Tropical Medicine, Epicentre (Paris), affiliation not provided to SSRN, University College London - Institute for Global Health, University of Nantes - l’institut du thorax, University of Cape Town Lung Institute, affiliation not provided to SSRN, Istituto Superiore di Sanità - Center for Global Health, University of California, San Francisco (UCSF), affiliation not provided to SSRN, UNC Global Projects, affiliation not provided to SSRN, Epicentre (Mbarara), Médecins Sans Frontières - Southern Africa Medical Unit, affiliation not provided to SSRN, Stellenbosch University, University of Cape Town (UCT), Texas Biomedical Research Institute, Columbia University, National Health Laboratory Services (NHLS) - National Institute for Communicable Diseases, University of New South Wales (UNSW) - Kirby Institute, University of California, San Francisco (UCSF) - UCSF Center for Tuberculosis, University of Cape Town (UCT) - Wellcome Centre for Infectious Diseases Research in Africa, University of Cape Town (UCT) - Division of Clinical Pharmacology, University of Cape Town (UCT) - Institute of Infectious Disease and Molecular Medicine, Stellenbosch University - DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, University of Cape Town (UCT) - Centre for Lung Infection and Immunity, London School of Hygiene & Tropical Medicine and Heidelberg University Hospital - Division of Infectious Disease and Tropical Medicine and German Centre for Infection Research

University of Washington, University of Washington, University of Alabama at Birmingham, University of Washington, Johns Hopkins University, University of the Witwatersrand - Reproductive Health and HIV Research Unit (RHRU), University of Cape Town (UCT), University of Cape Town (UCT), University of Cape Town (UCT), University of Cape Town (UCT), Qhakaza Mbokodo Research Clinic, Human Sciences Research Council (HSRC) - Centre for Community Based Research, Human Sciences Research Council (HSRC), Foundation for Professional Development, Wits Maternal Adolescent and Child Health Research, Setshaba Research Centre, Chris Hani Baragwanath Academic Hospital - Perinatal HIV Research Unit, University of the Witwatersrand, Klerksdorp-Tshepong Hospital Complex, Aurum Rustenburg Clinical Research Centre, Madibeng Centre for Research, South African Medical Research Council, Columbia University - ICAP, Kenya Medical Research Institute (KEMRI), Johns Hopkins Bloomberg School of Public Health, Malawi, UNC Global Projects, Bio Analytical Research Corporation South Africa (BARC SA), University of Washington, University of Washington, Fred Hutchinson Cancer Research Center and Independent

Centre for the AIDS Programme of Research in Africa (CAPRISA), University of KwaZulu- Natal, University of Washington, Fred Hutchinson Cancer Research Center, Johns Hopkins Bloomberg School of Public Health, Malawi, Fred Hutchinson Cancer Research Center, University of Zimbabwe, Fred Hutchinson Cancer Research Center, Fred Hutchinson Cancer Research Center, Fred Hutchinson Cancer Research Center, Fred Hutchinson Cancer Research Center, Fred Hutchinson Cancer Research Center, Fred Hutchinson Cancer Research Center, Fred Hutchinson Cancer Research Center - Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Duke University - Department of Surgery, Fred Hutchinson Cancer Research Center, Chris Hani Baragwanath Academic Hospital, KwaZulu-Natal Research Innovation and Sequencing Platform - KRISP, University of KwaZulu-Natal, University of KwaZulu-Natal - School of Laboratory Medicine and Medical Sciences, Fred Hutchinson Cancer Research Center, Fred Hutchinson Cancer Research Center, National Institutes of Health, National Institutes of Health, COVID-19 Prevention Network, University of Zimbabwe - Faculty of Medicine and Health Sciences, Baylor College of Medicine, Botswana Harvard AIDS Institute Partnership (BHP), Centre for Infectious Disease Research in Zambia, Columbia University - ICAP, Wits University - Clinical HIV Research Unit, Aurum Institute, Synexus Helderberg, University of Cape Town Lung Institute, University of the Witwatersrand - Reproductive Health and HIV Research Unit (RHRU), TASK, FAMCRU Family Clinical Research Unit, University of Cape Town (UCT), Aurum Institute, University of North Carolina (UNC) at Chapel Hill - UNC-Project Malawi, Center for Family Health Research Zambia (CFHRZ), The Aurum Institute, Aurum Institute, South African Medical Research Council, UNC Global Projects, Soweto Clinical Trials Centre, Blantyre District Council, Center for Family Health Research Zambia (CFHRZ), Wits Health Consortium - Perinatal HIV Research Unit (PHRU), Synergy Biomed Research Institute, MERC Middelburg, Kisumu Clinical Research Site, TASK, TASK, Aurum Institute, Nelson Mandela Academic Clinical Research Unit Clinical Research Site, University of the Witwatersrand - Perinatal HIV Research Unit, Joint Clinical Research Centre, University of KwaZulu-Natal, South African Medical Research Council, Soweto Clinical Trials Centre, UVRI-IAVI HIV Vaccine Program, MeCRU Clinical Research Site, Maseno University, Synexus Stanza Clinical Research Centre Clinical Research Site, University of KwaZulu-Natal, PHOENIX Pharma (Pty) Ltd, Moi University, University of Cape Town (UCT), MERC Kempton, MERC Welkom, MU-JHU Care Ltd - MUJHU Research Collaboration, Fred Hutchinson Cancer Research Center - Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, University of Cape Town (UCT) - Desmond Tutu HIV Centre, Fred Hutchinson Cancer Research Center - Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center - Vaccine and Infectious Disease Division, South African Medical Research Council, Fred Hutchinson Cancer Research Center - Vaccine and Infectious Disease Division, Qhakaza Mbokodo Research Clinic and Independent